Protein–RNA interactions for Protein: Q15818

NPTX1, Neuronal pentraxin-1, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX1Q15818 AC092628.2-201ENST00000622492 339 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPTX1Q15818 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPTX1Q15818 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.8□□□□□ -1.8
NPTX1Q15818 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
NPTX1Q15818 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPTX1Q15818 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPTX1Q15818 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.8□□□□□ -1.8
NPTX1Q15818 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPTX1Q15818 CDR1-202ENST00000625883 1485 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 OTUD4P1-201ENST00000237841 3067 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.79□□□□□ -1.8
NPTX1Q15818 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPTX1Q15818 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.79□□□□□ -1.8
NPTX1Q15818 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.79□□□□□ -1.8
NPTX1Q15818 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.79□□□□□ -1.8
NPTX1Q15818 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPTX1Q15818 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPTX1Q15818 Y_RNA.192-201ENST00000363977 102 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 MIR1250-201ENST00000408098 113 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 ELOCP9-201ENST00000418624 239 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 HMGB1P49-201ENST00000418882 569 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 RPS27AP7-201ENST00000422792 455 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 AC245028.1-201ENST00000423259 256 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 AL732292.1-201ENST00000426692 226 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 HMGB3P5-201ENST00000428894 612 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 AC096638.2-201ENST00000434965 711 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 Z73417.1-201ENST00000447373 778 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 AC009963.2-201ENST00000453431 138 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 NDUFA12P1-201ENST00000455914 406 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.79□□□□□ -1.8
NPTX1Q15818 AC041039.1-201ENST00000485656 536 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 AC013356.1-201ENST00000489027 564 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.79□□□□□ -1.8
NPTX1Q15818 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.79□□□□□ -1.8
NPTX1Q15818 PTGES3P3-201ENST00000511479 482 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.79□□□□□ -1.8
NPTX1Q15818 RN7SKP31-201ENST00000516354 278 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 RNU7-143P-201ENST00000516781 65 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 OR4A12P-201ENST00000530847 918 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 AC105233.3-201ENST00000531125 744 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.79□□□□□ -1.8
NPTX1Q15818 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NPTX1Q15818 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.79□□□□□ -1.8
NPTX1Q15818 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.79□□□□□ -1.8
NPTX1Q15818 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.79□□□□□ -1.8
NPTX1Q15818 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.79□□□□□ -1.8
NPTX1Q15818 RPL23AP87-202ENST00000573039 466 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 MIR3186-201ENST00000577404 85 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.79□□□□□ -1.8
NPTX1Q15818 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NPTX1Q15818 AC113368.1-201ENST00000603736 382 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 AC025588.3-201ENST00000604182 274 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 AC114878.2-201ENST00000604863 1251 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.79□□□□□ -1.8
NPTX1Q15818 AL513477.2-201ENST00000607858 568 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 AL451074.6-201ENST00000608512 729 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 AC063944.3-201ENST00000609969 533 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 AC231759.1-201ENST00000616455 597 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 AC006065.5-201ENST00000623427 349 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 AC092184.1-201ENST00000625042 715 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.79□□□□□ -1.8
NPTX1Q15818 MTCO1P14-201ENST00000441695 1559 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 PABPC1P7-201ENST00000413177 1513 ntBASIC3.79□□□□□ -1.8
NPTX1Q15818 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPTX1Q15818 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPTX1Q15818 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPTX1Q15818 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPTX1Q15818 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
NPTX1Q15818 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPTX1Q15818 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
NPTX1Q15818 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPTX1Q15818 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NPTX1Q15818 OR11H4-201ENST00000315409 1082 ntBASIC3.78□□□□□ -1.8
NPTX1Q15818 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NPTX1Q15818 RNU6-374P-201ENST00000364146 108 ntBASIC3.78□□□□□ -1.8
NPTX1Q15818 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
NPTX1Q15818 Y_RNA.408-201ENST00000383987 102 ntBASIC3.78□□□□□ -1.8
NPTX1Q15818 RNU6-328P-201ENST00000390887 106 ntBASIC3.78□□□□□ -1.8
NPTX1Q15818 RNU4-25P-201ENST00000410569 230 ntBASIC3.78□□□□□ -1.8
NPTX1Q15818 HIGD1AP15-201ENST00000416198 280 ntBASIC3.78□□□□□ -1.8
NPTX1Q15818 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPTX1Q15818 USP9YP11-201ENST00000427537 717 ntBASIC3.78□□□□□ -1.8
NPTX1Q15818 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.78□□□□□ -1.8
NPTX1Q15818 RPL23AP33-201ENST00000442301 452 ntBASIC3.78□□□□□ -1.8
NPTX1Q15818 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.78□□□□□ -1.8
NPTX1Q15818 AC006011.1-201ENST00000442758 349 ntBASIC3.78□□□□□ -1.8
NPTX1Q15818 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.78□□□□□ -1.8
NPTX1Q15818 AC009220.1-201ENST00000451614 275 ntBASIC3.78□□□□□ -1.8
NPTX1Q15818 RNA5SP246-201ENST00000458909 119 ntBASIC3.78□□□□□ -1.8
NPTX1Q15818 RN7SL93P-201ENST00000463035 293 ntBASIC3.78□□□□□ -1.8
NPTX1Q15818 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.78□□□□□ -1.8
NPTX1Q15818 AL136126.1-201ENST00000473603 402 ntBASIC3.78□□□□□ -1.8
NPTX1Q15818 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.78□□□□□ -1.8
NPTX1Q15818 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.78□□□□□ -1.8
NPTX1Q15818 RN7SL271P-201ENST00000487601 295 ntBASIC3.78□□□□□ -1.8
NPTX1Q15818 AC091951.3-201ENST00000504093 246 ntBASIC3.78□□□□□ -1.8
NPTX1Q15818 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.78□□□□□ -1.8
NPTX1Q15818 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms