Protein–RNA interactions for Protein: Q12860

CNTN1, Contactin-1, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1Q12860 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CNTN1Q12860 RNU4-51P-201ENST00000364206 140 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AL079342.2-201ENST00000403367 482 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 RNA5SP239-201ENST00000410218 129 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 RN7SKP56-201ENST00000410513 331 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 RPS3AP25-201ENST00000411660 793 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AC093578.1-201ENST00000415219 368 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 NUP35P2-201ENST00000416748 943 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.77□□□□□ -1.81
CNTN1Q12860 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.77□□□□□ -1.81
CNTN1Q12860 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.77□□□□□ -1.81
CNTN1Q12860 YME1L1P1-201ENST00000429435 297 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AL050321.1-201ENST00000432363 400 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 ATP5HP2-201ENST00000433885 485 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AL356535.1-201ENST00000440335 398 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.77□□□□□ -1.81
CNTN1Q12860 AL031313.1-201ENST00000448435 256 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.77□□□□□ -1.81
CNTN1Q12860 AL133477.1-201ENST00000457472 514 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 snoU13.7-201ENST00000459220 104 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 RPL7L1P8-201ENST00000469911 741 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AC084198.1-201ENST00000477747 402 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.77□□□□□ -1.81
CNTN1Q12860 AC109458.1-201ENST00000508858 316 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AC048346.1-201ENST00000510247 144 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AC104619.4-201ENST00000510773 249 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.77□□□□□ -1.81
CNTN1Q12860 RNA5SP208-201ENST00000516156 78 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.77□□□□□ -1.81
CNTN1Q12860 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
CNTN1Q12860 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.77□□□□□ -1.81
CNTN1Q12860 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.77□□□□□ -1.81
CNTN1Q12860 AC074029.1-201ENST00000552531 1044 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 MTCYBP23-201ENST00000558717 1102 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AC090877.1-201ENST00000561418 344 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.77□□□□□ -1.81
CNTN1Q12860 AL160237.3-201ENST00000604114 1013 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AL445435.1-201ENST00000604232 665 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AC027449.1-201ENST00000608890 407 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AC009237.15-201ENST00000610252 501 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AL592148.2-201ENST00000612210 372 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.77□□□□□ -1.81
CNTN1Q12860 AC244100.1-202ENST00000621554 382 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.77□□□□□ -1.81
CNTN1Q12860 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CNTN1Q12860 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CNTN1Q12860 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CNTN1Q12860 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
CNTN1Q12860 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.76□□□□□ -1.81
CNTN1Q12860 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CNTN1Q12860 AC000367.1-201ENST00000452711 1766 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CNTN1Q12860 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CNTN1Q12860 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CNTN1Q12860 RNA5SP119-201ENST00000362715 117 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 RNA5SP51-201ENST00000364750 119 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 SNORA72.3-201ENST00000365074 132 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.76□□□□□ -1.81
CNTN1Q12860 RNU6-584P-201ENST00000410350 95 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 AC004987.3-201ENST00000413879 771 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 AC009237.2-201ENST00000421358 284 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.76□□□□□ -1.81
CNTN1Q12860 RPL36P19-201ENST00000430744 301 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.76□□□□□ -1.81
CNTN1Q12860 PPIAP17-201ENST00000438507 471 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.76□□□□□ -1.81
CNTN1Q12860 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CNTN1Q12860 HMGB3P22-202ENST00000451823 572 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.76□□□□□ -1.81
CNTN1Q12860 DUXAP8-207ENST00000456786 622 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.76□□□□□ -1.81
CNTN1Q12860 NF1P3-201ENST00000457709 450 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CNTN1Q12860 TRAV31-201ENST00000502780 342 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.76□□□□□ -1.81
CNTN1Q12860 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.76□□□□□ -1.81
CNTN1Q12860 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.76□□□□□ -1.81
CNTN1Q12860 AP001207.1-201ENST00000524051 481 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CNTN1Q12860 MTND2P26-201ENST00000528255 1029 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 OR4C2P-201ENST00000530855 1064 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.76□□□□□ -1.81
CNTN1Q12860 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.76□□□□□ -1.81
CNTN1Q12860 CCNG2P1-201ENST00000549521 1000 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.76□□□□□ -1.81
CNTN1Q12860 AL049838.1-201ENST00000563647 981 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.76□□□□□ -1.81
CNTN1Q12860 VN1R79P-201ENST00000593540 513 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.76□□□□□ -1.81
CNTN1Q12860 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.76□□□□□ -1.81
CNTN1Q12860 AL157392.4-201ENST00000609756 345 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 DUXAP10-204ENST00000612052 616 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 AC087821.2-201ENST00000637086 450 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 MAPK10-372ENST00000641954 3413 ntBASIC3.76□□□□□ -1.81
CNTN1Q12860 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.76□□□□□ -1.81
CNTN1Q12860 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CNTN1Q12860 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CNTN1Q12860 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CNTN1Q12860 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms