Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 OR4R3P-201ENST00000525084 838 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.01□□□□□ -1.77
GABPAQ06546 AC087894.1-201ENST00000538359 518 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.01□□□□□ -1.77
GABPAQ06546 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.01□□□□□ -1.77
GABPAQ06546 AL121576.1-201ENST00000556055 276 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.01□□□□□ -1.77
GABPAQ06546 RPL21P12-201ENST00000559810 515 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.01□□□□□ -1.77
GABPAQ06546 AP000919.1-202ENST00000581139 1264 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.01□□□□□ -1.77
GABPAQ06546 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.01□□□□□ -1.77
GABPAQ06546 CKS1BP3-201ENST00000600888 237 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 AC068620.3-201ENST00000602749 560 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 BNIP3P31-201ENST00000604515 566 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 BNIP3P4-201ENST00000604946 565 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 AC018926.3-201ENST00000618841 406 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
GABPAQ06546 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
GABPAQ06546 PNPT1P2-201ENST00000456768 2050 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
GABPAQ06546 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
GABPAQ06546 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
GABPAQ06546 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
GABPAQ06546 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4□□□□□ -1.77
GABPAQ06546 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4□□□□□ -1.77
GABPAQ06546 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4□□□□□ -1.77
GABPAQ06546 RNA5SP502-201ENST00000362694 119 ntBASIC4□□□□□ -1.77
GABPAQ06546 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4□□□□□ -1.77
GABPAQ06546 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4□□□□□ -1.77
GABPAQ06546 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4□□□□□ -1.77
GABPAQ06546 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4□□□□□ -1.77
GABPAQ06546 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4□□□□□ -1.77
GABPAQ06546 CYP4F29P-201ENST00000420685 446 ntBASIC4□□□□□ -1.77
GABPAQ06546 RPL30P3-201ENST00000424262 333 ntBASIC4□□□□□ -1.77
GABPAQ06546 AC012497.1-201ENST00000429392 575 ntBASIC4□□□□□ -1.77
GABPAQ06546 RPS6P12-201ENST00000432491 726 ntBASIC4□□□□□ -1.77
GABPAQ06546 HMGB1P45-201ENST00000435986 653 ntBASIC4□□□□□ -1.77
GABPAQ06546 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4□□□□□ -1.77
GABPAQ06546 FABP5P3-201ENST00000437960 408 ntBASIC4□□□□□ -1.77
GABPAQ06546 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4□□□□□ -1.77
GABPAQ06546 AC004865.1-201ENST00000442276 1003 ntBASIC4□□□□□ -1.77
GABPAQ06546 DCLRE1CP1-201ENST00000454630 470 ntBASIC4□□□□□ -1.77
GABPAQ06546 MTCO3P20-201ENST00000454926 688 ntBASIC4□□□□□ -1.77
GABPAQ06546 AC026427.2-201ENST00000506228 536 ntBASIC4□□□□□ -1.77
GABPAQ06546 MTATP6P22-201ENST00000507369 598 ntBASIC4□□□□□ -1.77
GABPAQ06546 C1GALT1P2-201ENST00000510813 1104 ntBASIC4□□□□□ -1.77
GABPAQ06546 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4□□□□□ -1.77
GABPAQ06546 PHBP14-201ENST00000512887 367 ntBASIC4□□□□□ -1.77
GABPAQ06546 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4□□□□□ -1.77
GABPAQ06546 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4□□□□□ -1.77
GABPAQ06546 SNORD116-26-201ENST00000516006 96 ntBASIC4□□□□□ -1.77
GABPAQ06546 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4□□□□□ -1.77
GABPAQ06546 UBE2NP1-201ENST00000545592 458 ntBASIC4□□□□□ -1.77
GABPAQ06546 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4□□□□□ -1.77
GABPAQ06546 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4□□□□□ -1.77
GABPAQ06546 AC006557.5-201ENST00000603126 811 ntBASIC4□□□□□ -1.77
GABPAQ06546 HMGB1P50-201ENST00000605814 607 ntBASIC4□□□□□ -1.77
GABPAQ06546 AL354976.1-201ENST00000613843 387 ntBASIC4□□□□□ -1.77
GABPAQ06546 MIR8057-201ENST00000620957 69 ntBASIC4□□□□□ -1.77
GABPAQ06546 AC092608.3-201ENST00000625017 386 ntBASIC4□□□□□ -1.77
GABPAQ06546 AL590396.4-201ENST00000636779 956 ntBASIC4□□□□□ -1.77
GABPAQ06546 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
GABPAQ06546 AC046144.1-201ENST00000478559 1853 ntBASIC4□□□□□ -1.77
GABPAQ06546 AP001486.2-201ENST00000561652 5113 ntBASIC4□□□□□ -1.77
GABPAQ06546 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
GABPAQ06546 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 OR11H5P-202ENST00000641612 1325 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 Z83843.1-201ENST00000604070 3685 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
GABPAQ06546 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
GABPAQ06546 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.99□□□□□ -1.77
GABPAQ06546 HMGN1P24-201ENST00000412282 298 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 PRELID3BP11-201ENST00000414230 479 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.99□□□□□ -1.77
GABPAQ06546 RAC1P3-201ENST00000416129 580 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.99□□□□□ -1.77
GABPAQ06546 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.99□□□□□ -1.77
GABPAQ06546 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.99□□□□□ -1.77
GABPAQ06546 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.99□□□□□ -1.77
GABPAQ06546 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.99□□□□□ -1.77
GABPAQ06546 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.99□□□□□ -1.77
GABPAQ06546 AL357552.1-201ENST00000445254 415 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 OR51B8P-201ENST00000449892 769 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 AC008280.2-201ENST00000455473 307 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 RPS4XP2-201ENST00000458402 793 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.99□□□□□ -1.77
GABPAQ06546 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.99□□□□□ -1.77
GABPAQ06546 MTND3P3-201ENST00000505004 126 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 AC021678.1-201ENST00000505195 936 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 AC112198.1-201ENST00000505369 1220 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.99□□□□□ -1.77
GABPAQ06546 AC022790.1-201ENST00000522872 204 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 AP003066.2-201ENST00000529375 555 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.99□□□□□ -1.77
GABPAQ06546 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.99□□□□□ -1.77
GABPAQ06546 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.99□□□□□ -1.77
GABPAQ06546 AC023825.1-201ENST00000566704 1030 ntBASIC3.99□□□□□ -1.77
GABPAQ06546 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms