Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.52□□□□□ -2.01
LSM3P62310 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.52□□□□□ -2.01
LSM3P62310 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.52□□□□□ -2.01
LSM3P62310 ARL5AP2-201ENST00000444698 533 ntBASIC2.52□□□□□ -2.01
LSM3P62310 Z95327.1-201ENST00000446082 482 ntBASIC2.52□□□□□ -2.01
LSM3P62310 RAB28P3-201ENST00000448325 597 ntBASIC2.52□□□□□ -2.01
LSM3P62310 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.52□□□□□ -2.01
LSM3P62310 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.52□□□□□ -2.01
LSM3P62310 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.52□□□□□ -2.01
LSM3P62310 AC117440.1-201ENST00000474107 571 ntBASIC2.52□□□□□ -2.01
LSM3P62310 RPS27AP1-201ENST00000475545 471 ntBASIC2.52□□□□□ -2.01
LSM3P62310 NCOR1P1-202ENST00000486162 291 ntBASIC2.52□□□□□ -2.01
LSM3P62310 AC110792.2-201ENST00000510278 224 ntBASIC2.52□□□□□ -2.01
LSM3P62310 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.52□□□□□ -2.01
LSM3P62310 RN7SKP234-201ENST00000517173 224 ntBASIC2.52□□□□□ -2.01
LSM3P62310 SOD1P3-201ENST00000518682 454 ntBASIC2.52□□□□□ -2.01
LSM3P62310 CR383656.6-201ENST00000550518 394 ntBASIC2.52□□□□□ -2.01
LSM3P62310 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.52□□□□□ -2.01
LSM3P62310 AL355836.1-201ENST00000555951 870 ntBASIC2.52□□□□□ -2.01
LSM3P62310 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.52□□□□□ -2.01
LSM3P62310 AC010735.1-201ENST00000567305 1026 ntBASIC2.52□□□□□ -2.01
LSM3P62310 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.52□□□□□ -2.01
LSM3P62310 MIR3922-201ENST00000585192 84 ntBASIC2.52□□□□□ -2.01
LSM3P62310 AC005242.1-201ENST00000585658 438 ntBASIC2.52□□□□□ -2.01
LSM3P62310 AC245128.3-201ENST00000594721 748 ntBASIC2.52□□□□□ -2.01
LSM3P62310 AC007566.2-201ENST00000603642 413 ntBASIC2.52□□□□□ -2.01
LSM3P62310 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.52□□□□□ -2.01
LSM3P62310 AC131902.3-201ENST00000611767 581 ntBASIC2.52□□□□□ -2.01
LSM3P62310 AC018692.3-201ENST00000623929 123 ntBASIC2.52□□□□□ -2.01
LSM3P62310 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.52□□□□□ -2.01
LSM3P62310 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.52□□□□□ -2.01
LSM3P62310 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LSM3P62310 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
LSM3P62310 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LSM3P62310 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LSM3P62310 AC009501.3-201ENST00000605001 1352 ntBASIC2.51□□□□□ -2.01
LSM3P62310 AC080100.1-201ENST00000624239 5356 ntBASIC2.51□□□□□ -2.01
LSM3P62310 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.51□□□□□ -2.01
LSM3P62310 RNA5SP189-201ENST00000364920 115 ntBASIC2.51□□□□□ -2.01
LSM3P62310 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
LSM3P62310 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LSM3P62310 AC092638.1-201ENST00000411966 1275 ntBASIC2.51□□□□□ -2.01
LSM3P62310 TRGV6-201ENST00000417928 299 ntBASIC2.51□□□□□ -2.01
LSM3P62310 AL353678.1-201ENST00000422735 741 ntBASIC2.51□□□□□ -2.01
LSM3P62310 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LSM3P62310 TRGV7-201ENST00000427089 353 ntBASIC2.51□□□□□ -2.01
LSM3P62310 HIGD1AP11-201ENST00000438361 280 ntBASIC2.51□□□□□ -2.01
LSM3P62310 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.51□□□□□ -2.01
LSM3P62310 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC2.51□□□□□ -2.01
LSM3P62310 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.51□□□□□ -2.01
LSM3P62310 RPL23AP20-201ENST00000447965 421 ntBASIC2.51□□□□□ -2.01
LSM3P62310 TPT1P13-201ENST00000449760 499 ntBASIC2.51□□□□□ -2.01
LSM3P62310 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.51□□□□□ -2.01
LSM3P62310 AC027673.1-201ENST00000456245 405 ntBASIC2.51□□□□□ -2.01
LSM3P62310 HMGN2P16-201ENST00000456802 261 ntBASIC2.51□□□□□ -2.01
LSM3P62310 RPS26P21-201ENST00000475397 348 ntBASIC2.51□□□□□ -2.01
LSM3P62310 AP001025.2-201ENST00000490908 477 ntBASIC2.51□□□□□ -2.01
LSM3P62310 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.51□□□□□ -2.01
LSM3P62310 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.51□□□□□ -2.01
LSM3P62310 AC026412.2-201ENST00000512270 1075 ntBASIC2.51□□□□□ -2.01
LSM3P62310 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.51□□□□□ -2.01
LSM3P62310 RN7SKP272-201ENST00000516988 232 ntBASIC2.51□□□□□ -2.01
LSM3P62310 AC090136.1-201ENST00000520009 240 ntBASIC2.51□□□□□ -2.01
LSM3P62310 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.51□□□□□ -2.01
LSM3P62310 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.51□□□□□ -2.01
LSM3P62310 HPRT1P3-201ENST00000539521 576 ntBASIC2.51□□□□□ -2.01
LSM3P62310 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.51□□□□□ -2.01
LSM3P62310 AC007458.1-201ENST00000542812 373 ntBASIC2.51□□□□□ -2.01
LSM3P62310 MIR3605-201ENST00000583214 100 ntBASIC2.51□□□□□ -2.01
LSM3P62310 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.51□□□□□ -2.01
LSM3P62310 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.51□□□□□ -2.01
LSM3P62310 CKS1BP3-201ENST00000600888 237 ntBASIC2.51□□□□□ -2.01
LSM3P62310 AL160237.3-201ENST00000604114 1013 ntBASIC2.51□□□□□ -2.01
LSM3P62310 SNORA35B-201ENST00000607417 129 ntBASIC2.51□□□□□ -2.01
LSM3P62310 AC006338.2-201ENST00000616864 791 ntBASIC2.51□□□□□ -2.01
LSM3P62310 CR381653.2-201ENST00000624041 768 ntBASIC2.51□□□□□ -2.01
LSM3P62310 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.51□□□□□ -2.01
LSM3P62310 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.51□□□□□ -2.01
LSM3P62310 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.51□□□□□ -2.01
LSM3P62310 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.5□□□□□ -2.01
LSM3P62310 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.5□□□□□ -2.01
LSM3P62310 DPY19L2P2-203ENST00000435536 1858 ntBASIC2.5□□□□□ -2.01
LSM3P62310 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LSM3P62310 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.5□□□□□ -2.01
LSM3P62310 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.5□□□□□ -2.01
LSM3P62310 SMC4P1-201ENST00000414479 527 ntBASIC2.5□□□□□ -2.01
LSM3P62310 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.5□□□□□ -2.01
LSM3P62310 BRWD1P3-201ENST00000428816 390 ntBASIC2.5□□□□□ -2.01
LSM3P62310 AL445584.1-201ENST00000431451 330 ntBASIC2.5□□□□□ -2.01
LSM3P62310 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.5□□□□□ -2.01
LSM3P62310 HMGB1P45-201ENST00000435986 653 ntBASIC2.5□□□□□ -2.01
LSM3P62310 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
LSM3P62310 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.5□□□□□ -2.01
LSM3P62310 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LSM3P62310 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.5□□□□□ -2.01
LSM3P62310 AC090071.1-201ENST00000507713 644 ntBASIC2.5□□□□□ -2.01
LSM3P62310 MTND4LP22-201ENST00000508209 276 ntBASIC2.5□□□□□ -2.01
LSM3P62310 HPRT1P1-201ENST00000509498 657 ntBASIC2.5□□□□□ -2.01
LSM3P62310 AC023141.12-201ENST00000512399 199 ntBASIC2.5□□□□□ -2.01
LSM3P62310 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms