Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 SETP8-201ENST00000435341 628 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.39□□□□□ -1.71
HDAC4P56524 CDC27P1-201ENST00000445384 715 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 OR6K5P-201ENST00000447050 945 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 HMGN3P1-201ENST00000453847 193 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 ANKRD26P4-201ENST00000455755 950 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 AC010307.1-201ENST00000467206 836 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 RPS29P19-201ENST00000479709 171 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 RPS3AP22-201ENST00000488297 769 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.39□□□□□ -1.71
HDAC4P56524 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.39□□□□□ -1.71
HDAC4P56524 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.39□□□□□ -1.71
HDAC4P56524 AC116353.3-201ENST00000511215 249 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.39□□□□□ -1.71
HDAC4P56524 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.39□□□□□ -1.71
HDAC4P56524 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.39□□□□□ -1.71
HDAC4P56524 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.39□□□□□ -1.71
HDAC4P56524 AC092851.1-201ENST00000535964 478 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 EIF5A2P1-201ENST00000564027 460 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 CYP4A43P-201ENST00000568156 121 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 MIR4504-201ENST00000577413 92 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC4P56524 LLPHP1-201ENST00000603571 367 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 AC114878.2-201ENST00000604863 1251 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 AC018638.7-201ENST00000605836 1114 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 AL451074.6-201ENST00000608512 729 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 AC073348.1-201ENST00000623002 331 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 AC007490.1-201ENST00000624321 703 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HDAC4P56524 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC4P56524 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC4P56524 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC4P56524 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
HDAC4P56524 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.39□□□□□ -1.71
HDAC4P56524 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC4P56524 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC4P56524 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC4P56524 MAPK10-372ENST00000641954 3413 ntBASIC4.39□□□□□ -1.71
HDAC4P56524 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC4P56524 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
HDAC4P56524 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
HDAC4P56524 AC011978.2-201ENST00000569835 2054 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC4P56524 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC4P56524 RNU6-492P-201ENST00000363035 104 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 RNU5D-1-201ENST00000363299 116 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC4P56524 MIR124-3-201ENST00000384866 87 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 MIR153-1-201ENST00000384914 90 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 RPL23AP47-201ENST00000408017 460 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 RNU6-757P-201ENST00000410334 100 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 RPL23AP26-201ENST00000412728 464 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 AL136133.1-201ENST00000413694 376 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC4P56524 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC4P56524 FCF1P2-201ENST00000415284 583 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.38□□□□□ -1.71
HDAC4P56524 BOLA3P4-201ENST00000418151 400 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.38□□□□□ -1.71
HDAC4P56524 AC011233.1-201ENST00000422812 283 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 RPP40P1-201ENST00000426762 456 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 OR4F13P-201ENST00000428478 931 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 TXNL1P1-201ENST00000429528 554 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 MTND5P25-201ENST00000430499 799 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 ATP5F1P1-201ENST00000433775 569 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC4P56524 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.38□□□□□ -1.71
HDAC4P56524 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.38□□□□□ -1.71
HDAC4P56524 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC4P56524 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.38□□□□□ -1.71
HDAC4P56524 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC4P56524 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC4P56524 SNRPGP5-201ENST00000456003 220 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 ATG12P2-201ENST00000456830 416 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.38□□□□□ -1.71
HDAC4P56524 AC087385.1-201ENST00000475062 312 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC4P56524 AP000926.1-201ENST00000479573 241 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.38□□□□□ -1.71
HDAC4P56524 AC091167.1-201ENST00000492017 396 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC4P56524 AC108475.1-201ENST00000507880 950 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.38□□□□□ -1.71
HDAC4P56524 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.38□□□□□ -1.71
HDAC4P56524 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC4P56524 KCTD9P2-201ENST00000512203 1013 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 FTH1P9-201ENST00000513251 355 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 MRPS33P3-201ENST00000513456 322 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 HNRNPKP5-201ENST00000515300 253 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 RN7SKP277-201ENST00000516895 283 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC4P56524 AP000926.4-201ENST00000527351 454 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.38□□□□□ -1.71
HDAC4P56524 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.38□□□□□ -1.71
HDAC4P56524 AC107016.1-201ENST00000550463 337 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.38□□□□□ -1.71
HDAC4P56524 MIR3138-201ENST00000585238 82 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.38□□□□□ -1.71
HDAC4P56524 AC093227.2-201ENST00000589357 285 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms