Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 OR4R3P-201ENST00000525084 838 ntBASIC3.52□□□□□ -1.85
CDH6P55285 OR8I1P-201ENST00000529291 931 ntBASIC3.52□□□□□ -1.85
CDH6P55285 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.52□□□□□ -1.85
CDH6P55285 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH6P55285 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH6P55285 MIR3922-201ENST00000585192 84 ntBASIC3.52□□□□□ -1.85
CDH6P55285 AC245389.1-201ENST00000605141 529 ntBASIC3.52□□□□□ -1.85
CDH6P55285 U3.45-201ENST00000607547 219 ntBASIC3.52□□□□□ -1.85
CDH6P55285 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.52□□□□□ -1.85
CDH6P55285 AC017104.5-201ENST00000637647 639 ntBASIC3.52□□□□□ -1.85
CDH6P55285 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.52□□□□□ -1.85
CDH6P55285 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH6P55285 MTCO1P18-201ENST00000455518 1419 ntBASIC3.52□□□□□ -1.85
CDH6P55285 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CDH6P55285 MTND5P11-201ENST00000511037 1812 ntBASIC3.51□□□□□ -1.85
CDH6P55285 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH6P55285 AC017071.1-201ENST00000564407 2204 ntBASIC3.51□□□□□ -1.85
CDH6P55285 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDH6P55285 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH6P55285 SEC63P2-201ENST00000503863 1939 ntBASIC3.51□□□□□ -1.85
CDH6P55285 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH6P55285 ENSAP3-201ENST00000312710 333 ntBASIC3.51□□□□□ -1.85
CDH6P55285 EIF5P1-201ENST00000400019 1231 ntBASIC3.51□□□□□ -1.85
CDH6P55285 AL356057.1-202ENST00000402263 756 ntBASIC3.51□□□□□ -1.85
CDH6P55285 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH6P55285 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.51□□□□□ -1.85
CDH6P55285 PNRC2P1-201ENST00000423940 420 ntBASIC3.51□□□□□ -1.85
CDH6P55285 MTCO1P43-201ENST00000431831 488 ntBASIC3.51□□□□□ -1.85
CDH6P55285 HMGN2P31-201ENST00000432430 273 ntBASIC3.51□□□□□ -1.85
CDH6P55285 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.51□□□□□ -1.85
CDH6P55285 BX679664.1-201ENST00000434429 253 ntBASIC3.51□□□□□ -1.85
CDH6P55285 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH6P55285 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH6P55285 PDSS1P2-201ENST00000449397 678 ntBASIC3.51□□□□□ -1.85
CDH6P55285 HMGB3P8-201ENST00000449709 577 ntBASIC3.51□□□□□ -1.85
CDH6P55285 RPL23AP15-201ENST00000450202 459 ntBASIC3.51□□□□□ -1.85
CDH6P55285 AC008280.2-201ENST00000455473 307 ntBASIC3.51□□□□□ -1.85
CDH6P55285 AC021205.2-201ENST00000480069 347 ntBASIC3.51□□□□□ -1.85
CDH6P55285 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.51□□□□□ -1.85
CDH6P55285 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH6P55285 AP002812.1-201ENST00000495378 474 ntBASIC3.51□□□□□ -1.85
CDH6P55285 AC112198.1-201ENST00000505369 1220 ntBASIC3.51□□□□□ -1.85
CDH6P55285 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.51□□□□□ -1.85
CDH6P55285 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDH6P55285 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.51□□□□□ -1.85
CDH6P55285 FCF1P8-201ENST00000510322 597 ntBASIC3.51□□□□□ -1.85
CDH6P55285 AC016065.2-201ENST00000514530 444 ntBASIC3.51□□□□□ -1.85
CDH6P55285 FABP5P12-201ENST00000515543 389 ntBASIC3.51□□□□□ -1.85
CDH6P55285 IGKV2-26-201ENST00000518305 343 ntBASIC3.51□□□□□ -1.85
CDH6P55285 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH6P55285 AP003717.3-201ENST00000544832 1180 ntBASIC3.51□□□□□ -1.85
CDH6P55285 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH6P55285 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.51□□□□□ -1.85
CDH6P55285 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH6P55285 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH6P55285 AC090616.5-202ENST00000582111 297 ntBASIC3.51□□□□□ -1.85
CDH6P55285 YWHAQP7-201ENST00000603536 658 ntBASIC3.51□□□□□ -1.85
CDH6P55285 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.51□□□□□ -1.85
CDH6P55285 AC092354.2-201ENST00000607786 514 ntBASIC3.51□□□□□ -1.85
CDH6P55285 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CDH6P55285 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH6P55285 FRG1DP-201ENST00000635586 771 ntBASIC3.51□□□□□ -1.85
CDH6P55285 AC127502.3-201ENST00000636170 1206 ntBASIC3.51□□□□□ -1.85
CDH6P55285 AL392088.2-201ENST00000637607 285 ntBASIC3.51□□□□□ -1.85
CDH6P55285 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH6P55285 AC021755.1-201ENST00000559747 1447 ntBASIC3.51□□□□□ -1.85
CDH6P55285 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.51□□□□□ -1.85
CDH6P55285 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.51□□□□□ -1.85
CDH6P55285 AC092326.2-201ENST00000624772 1561 ntBASIC3.51□□□□□ -1.85
CDH6P55285 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.5□□□□□ -1.85
CDH6P55285 AC234772.1-201ENST00000377927 937 ntBASIC3.5□□□□□ -1.85
CDH6P55285 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
CDH6P55285 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.5□□□□□ -1.85
CDH6P55285 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH6P55285 EI24P1-201ENST00000416584 867 ntBASIC3.5□□□□□ -1.85
CDH6P55285 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDH6P55285 AL513175.1-201ENST00000431492 780 ntBASIC3.5□□□□□ -1.85
CDH6P55285 AC233982.1-201ENST00000451247 436 ntBASIC3.5□□□□□ -1.85
CDH6P55285 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH6P55285 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH6P55285 RN7SKP157-201ENST00000516174 282 ntBASIC3.5□□□□□ -1.85
CDH6P55285 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.5□□□□□ -1.85
CDH6P55285 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH6P55285 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH6P55285 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH6P55285 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH6P55285 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH6P55285 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH6P55285 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH6P55285 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH6P55285 AC091488.1-201ENST00000604239 660 ntBASIC3.5□□□□□ -1.85
CDH6P55285 AC099778.2-201ENST00000610904 211 ntBASIC3.5□□□□□ -1.85
CDH6P55285 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH6P55285 MTND5P28-201ENST00000438005 1594 ntBASIC3.5□□□□□ -1.85
CDH6P55285 MTND4P8-201ENST00000514997 1362 ntBASIC3.5□□□□□ -1.85
CDH6P55285 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CDH6P55285 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH6P55285 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
CDH6P55285 AC007496.3-201ENST00000624987 3443 ntBASIC3.49□□□□□ -1.85
CDH6P55285 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms