Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH4P55283 AP001148.1-201ENST00000624124 2359 ntBASIC3.56□□□□□ -1.84
CDH4P55283 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH4P55283 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH4P55283 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH4P55283 MTCO1P12-201ENST00000414273 1543 ntBASIC3.56□□□□□ -1.84
CDH4P55283 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH4P55283 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH4P55283 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CDH4P55283 RNA5SP189-201ENST00000364920 115 ntBASIC3.56□□□□□ -1.84
CDH4P55283 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
CDH4P55283 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH4P55283 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
CDH4P55283 RPS3AP25-201ENST00000411660 793 ntBASIC3.56□□□□□ -1.84
CDH4P55283 AC069218.2-201ENST00000411665 344 ntBASIC3.56□□□□□ -1.84
CDH4P55283 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH4P55283 AL158825.1-201ENST00000414735 521 ntBASIC3.56□□□□□ -1.84
CDH4P55283 AC007390.1-201ENST00000415722 356 ntBASIC3.56□□□□□ -1.84
CDH4P55283 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH4P55283 AL159987.2-201ENST00000432754 307 ntBASIC3.56□□□□□ -1.84
CDH4P55283 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH4P55283 FABP5P3-201ENST00000437960 408 ntBASIC3.56□□□□□ -1.84
CDH4P55283 CYCSP43-201ENST00000438233 310 ntBASIC3.56□□□□□ -1.84
CDH4P55283 RNFT1P2-201ENST00000443064 757 ntBASIC3.56□□□□□ -1.84
CDH4P55283 RPS26P30-201ENST00000443431 335 ntBASIC3.56□□□□□ -1.84
CDH4P55283 MTND1P33-201ENST00000446251 917 ntBASIC3.56□□□□□ -1.84
CDH4P55283 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH4P55283 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH4P55283 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.56□□□□□ -1.84
CDH4P55283 AC026784.1-201ENST00000507986 352 ntBASIC3.56□□□□□ -1.84
CDH4P55283 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH4P55283 SETP12-201ENST00000514068 805 ntBASIC3.56□□□□□ -1.84
CDH4P55283 OR5D17P-201ENST00000531492 978 ntBASIC3.56□□□□□ -1.84
CDH4P55283 AC007458.1-201ENST00000542812 373 ntBASIC3.56□□□□□ -1.84
CDH4P55283 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.56□□□□□ -1.84
CDH4P55283 MIR5186-201ENST00000577504 120 ntBASIC3.56□□□□□ -1.84
CDH4P55283 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH4P55283 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH4P55283 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.56□□□□□ -1.84
CDH4P55283 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH4P55283 BNIP3P33-201ENST00000598912 569 ntBASIC3.56□□□□□ -1.84
CDH4P55283 BNIP3P38-201ENST00000601117 544 ntBASIC3.56□□□□□ -1.84
CDH4P55283 AC006254.3-201ENST00000603353 884 ntBASIC3.56□□□□□ -1.84
CDH4P55283 AC007566.2-201ENST00000603642 413 ntBASIC3.56□□□□□ -1.84
CDH4P55283 AL355365.1-201ENST00000616480 294 ntBASIC3.56□□□□□ -1.84
CDH4P55283 U73479.1-201ENST00000618062 168 ntBASIC3.56□□□□□ -1.84
CDH4P55283 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH4P55283 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH4P55283 MIR4278-201ENST00000636094 69 ntBASIC3.56□□□□□ -1.84
CDH4P55283 U6.105-201ENST00000637379 88 ntBASIC3.56□□□□□ -1.84
CDH4P55283 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH4P55283 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CDH4P55283 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH4P55283 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDH4P55283 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH4P55283 ELL2P4-201ENST00000446870 1376 ntBASIC3.55□□□□□ -1.84
CDH4P55283 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH4P55283 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH4P55283 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDH4P55283 RSL24D1P1-201ENST00000404972 493 ntBASIC3.55□□□□□ -1.84
CDH4P55283 RNU2-37P-201ENST00000410695 177 ntBASIC3.55□□□□□ -1.84
CDH4P55283 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH4P55283 AL049610.1-201ENST00000423374 372 ntBASIC3.55□□□□□ -1.84
CDH4P55283 VN1R42P-201ENST00000424651 344 ntBASIC3.55□□□□□ -1.84
CDH4P55283 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH4P55283 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH4P55283 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH4P55283 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH4P55283 AL357552.1-201ENST00000445254 415 ntBASIC3.55□□□□□ -1.84
CDH4P55283 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.55□□□□□ -1.84
CDH4P55283 PRDX3P3-201ENST00000447765 522 ntBASIC3.55□□□□□ -1.84
CDH4P55283 AC007967.1-201ENST00000455422 1159 ntBASIC3.55□□□□□ -1.84
CDH4P55283 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH4P55283 AC010468.3-201ENST00000508225 458 ntBASIC3.55□□□□□ -1.84
CDH4P55283 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH4P55283 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH4P55283 SNORA76.2-201ENST00000517095 137 ntBASIC3.55□□□□□ -1.84
CDH4P55283 OR4R3P-201ENST00000525084 838 ntBASIC3.55□□□□□ -1.84
CDH4P55283 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH4P55283 LINC00557-201ENST00000563184 1279 ntBASIC3.55□□□□□ -1.84
CDH4P55283 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH4P55283 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH4P55283 AC017100.2-201ENST00000584628 355 ntBASIC3.55□□□□□ -1.84
CDH4P55283 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH4P55283 AC006557.5-201ENST00000603126 811 ntBASIC3.55□□□□□ -1.84
CDH4P55283 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.55□□□□□ -1.84
CDH4P55283 AC012314.7-201ENST00000619693 93 ntBASIC3.55□□□□□ -1.84
CDH4P55283 AC022149.2-201ENST00000621061 203 ntBASIC3.55□□□□□ -1.84
CDH4P55283 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH4P55283 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH4P55283 AL356118.1-201ENST00000635272 1078 ntBASIC3.55□□□□□ -1.84
CDH4P55283 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.55□□□□□ -1.84
CDH4P55283 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CDH4P55283 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH4P55283 AL645937.1-201ENST00000641739 1652 ntBASIC3.55□□□□□ -1.84
CDH4P55283 PRO1804-201ENST00000623780 2050 ntBASIC3.55□□□□□ -1.84
CDH4P55283 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH4P55283 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDH4P55283 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH4P55283 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms