Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC244205.2-202ENST00000635781 342 ntBASIC3.96□□□□□ -1.78
VCPP55072 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.96□□□□□ -1.78
VCPP55072 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VCPP55072 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VCPP55072 MFSD8-236ENST00000641509 4050 ntBASIC3.96□□□□□ -1.78
VCPP55072 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.96□□□□□ -1.78
VCPP55072 MTCO1P18-201ENST00000455518 1419 ntBASIC3.95□□□□□ -1.78
VCPP55072 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.95□□□□□ -1.78
VCPP55072 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCPP55072 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.95□□□□□ -1.78
VCPP55072 AL133383.2-201ENST00000622958 2336 ntBASIC3.95□□□□□ -1.78
VCPP55072 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.95□□□□□ -1.78
VCPP55072 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCPP55072 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCPP55072 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCPP55072 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.95□□□□□ -1.78
VCPP55072 RNA5SP50-201ENST00000363731 107 ntBASIC3.95□□□□□ -1.78
VCPP55072 ZNF602P-201ENST00000405929 924 ntBASIC3.95□□□□□ -1.78
VCPP55072 RNU2-21P-201ENST00000410368 188 ntBASIC3.95□□□□□ -1.78
VCPP55072 HMGB3P31-201ENST00000413333 595 ntBASIC3.95□□□□□ -1.78
VCPP55072 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.95□□□□□ -1.78
VCPP55072 NUP35P2-201ENST00000416748 943 ntBASIC3.95□□□□□ -1.78
VCPP55072 AL159169.1-201ENST00000421119 127 ntBASIC3.95□□□□□ -1.78
VCPP55072 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.95□□□□□ -1.78
VCPP55072 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.95□□□□□ -1.78
VCPP55072 AL512637.2-201ENST00000431287 1256 ntBASIC3.95□□□□□ -1.78
VCPP55072 MTCO1P43-201ENST00000431831 488 ntBASIC3.95□□□□□ -1.78
VCPP55072 AC073063.1-201ENST00000434352 607 ntBASIC3.95□□□□□ -1.78
VCPP55072 RPS7P5-201ENST00000441482 581 ntBASIC3.95□□□□□ -1.78
VCPP55072 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.95□□□□□ -1.78
VCPP55072 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.95□□□□□ -1.78
VCPP55072 MTCO3P20-201ENST00000454926 688 ntBASIC3.95□□□□□ -1.78
VCPP55072 RPL32P14-201ENST00000463196 378 ntBASIC3.95□□□□□ -1.78
VCPP55072 RPL21P47-201ENST00000483696 477 ntBASIC3.95□□□□□ -1.78
VCPP55072 OR5H3P-201ENST00000502817 919 ntBASIC3.95□□□□□ -1.78
VCPP55072 RN7SKP209-201ENST00000516888 304 ntBASIC3.95□□□□□ -1.78
VCPP55072 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.95□□□□□ -1.78
VCPP55072 AC008562.1-201ENST00000521763 330 ntBASIC3.95□□□□□ -1.78
VCPP55072 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.95□□□□□ -1.78
VCPP55072 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.95□□□□□ -1.78
VCPP55072 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.95□□□□□ -1.78
VCPP55072 AP004242.1-201ENST00000533701 349 ntBASIC3.95□□□□□ -1.78
VCPP55072 OR8L1P-201ENST00000534005 955 ntBASIC3.95□□□□□ -1.78
VCPP55072 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.95□□□□□ -1.78
VCPP55072 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.95□□□□□ -1.78
VCPP55072 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.95□□□□□ -1.78
VCPP55072 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.95□□□□□ -1.78
VCPP55072 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.95□□□□□ -1.78
VCPP55072 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.95□□□□□ -1.78
VCPP55072 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.95□□□□□ -1.78
VCPP55072 AC245100.7-201ENST00000609678 442 ntBASIC3.95□□□□□ -1.78
VCPP55072 AC135507.2-201ENST00000612443 309 ntBASIC3.95□□□□□ -1.78
VCPP55072 AC119674.1-207ENST00000641355 633 ntBASIC3.95□□□□□ -1.78
VCPP55072 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
VCPP55072 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCPP55072 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCPP55072 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VCPP55072 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.94□□□□□ -1.78
VCPP55072 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VCPP55072 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VCPP55072 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
VCPP55072 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VCPP55072 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VCPP55072 MTND5P3-201ENST00000438536 1800 ntBASIC3.94□□□□□ -1.78
VCPP55072 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
VCPP55072 NACA3P-201ENST00000359690 648 ntBASIC3.94□□□□□ -1.78
VCPP55072 SNORD56.4-201ENST00000363883 71 ntBASIC3.94□□□□□ -1.78
VCPP55072 RNU6-1293P-201ENST00000384077 107 ntBASIC3.94□□□□□ -1.78
VCPP55072 RNU6-481P-201ENST00000384194 107 ntBASIC3.94□□□□□ -1.78
VCPP55072 SNORA48.5-201ENST00000391143 135 ntBASIC3.94□□□□□ -1.78
VCPP55072 HMGB3P18-201ENST00000406327 590 ntBASIC3.94□□□□□ -1.78
VCPP55072 RN7SKP284-201ENST00000411002 343 ntBASIC3.94□□□□□ -1.78
VCPP55072 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.94□□□□□ -1.78
VCPP55072 AL445183.3-201ENST00000414168 502 ntBASIC3.94□□□□□ -1.78
VCPP55072 AC008173.1-201ENST00000418901 264 ntBASIC3.94□□□□□ -1.78
VCPP55072 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.94□□□□□ -1.78
VCPP55072 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.94□□□□□ -1.78
VCPP55072 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.94□□□□□ -1.78
VCPP55072 ETF1P3-201ENST00000430422 1160 ntBASIC3.94□□□□□ -1.78
VCPP55072 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.94□□□□□ -1.78
VCPP55072 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
VCPP55072 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.94□□□□□ -1.78
VCPP55072 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.94□□□□□ -1.78
VCPP55072 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.94□□□□□ -1.78
VCPP55072 RPL29P29-201ENST00000448725 423 ntBASIC3.94□□□□□ -1.78
VCPP55072 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.94□□□□□ -1.78
VCPP55072 AC146507.1-201ENST00000468335 354 ntBASIC3.94□□□□□ -1.78
VCPP55072 SNRPGP3-201ENST00000469405 227 ntBASIC3.94□□□□□ -1.78
VCPP55072 RN7SL807P-201ENST00000470923 297 ntBASIC3.94□□□□□ -1.78
VCPP55072 AC015908.1-201ENST00000478739 476 ntBASIC3.94□□□□□ -1.78
VCPP55072 AP000563.1-201ENST00000490865 758 ntBASIC3.94□□□□□ -1.78
VCPP55072 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.94□□□□□ -1.78
VCPP55072 RAC1P2-201ENST00000511164 579 ntBASIC3.94□□□□□ -1.78
VCPP55072 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.94□□□□□ -1.78
VCPP55072 C1DP5-201ENST00000525775 383 ntBASIC3.94□□□□□ -1.78
VCPP55072 AP000916.1-201ENST00000533869 835 ntBASIC3.94□□□□□ -1.78
VCPP55072 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.94□□□□□ -1.78
VCPP55072 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.94□□□□□ -1.78
VCPP55072 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.94□□□□□ -1.78
VCPP55072 MIR5187-201ENST00000583479 76 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms