Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.9□□□□□ -1.79
PDX1P52945 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.9□□□□□ -1.79
PDX1P52945 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.9□□□□□ -1.79
PDX1P52945 MTND2P26-201ENST00000528255 1029 ntBASIC3.9□□□□□ -1.79
PDX1P52945 AC023050.2-201ENST00000544968 387 ntBASIC3.9□□□□□ -1.79
PDX1P52945 CCNG2P1-201ENST00000549521 1000 ntBASIC3.9□□□□□ -1.79
PDX1P52945 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.9□□□□□ -1.79
PDX1P52945 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.9□□□□□ -1.79
PDX1P52945 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.9□□□□□ -1.79
PDX1P52945 AGGF1P8-201ENST00000562979 1000 ntBASIC3.9□□□□□ -1.79
PDX1P52945 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.9□□□□□ -1.79
PDX1P52945 AC090312.1-201ENST00000580637 348 ntBASIC3.9□□□□□ -1.79
PDX1P52945 AC005255.1-201ENST00000593748 216 ntBASIC3.9□□□□□ -1.79
PDX1P52945 AL139395.1-201ENST00000603662 160 ntBASIC3.9□□□□□ -1.79
PDX1P52945 AC069200.1-201ENST00000609511 323 ntBASIC3.9□□□□□ -1.79
PDX1P52945 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
PDX1P52945 AC098679.5-201ENST00000624394 571 ntBASIC3.9□□□□□ -1.79
PDX1P52945 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.9□□□□□ -1.79
PDX1P52945 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.9□□□□□ -1.79
PDX1P52945 OR5BE1P-202ENST00000641168 1176 ntBASIC3.9□□□□□ -1.79
PDX1P52945 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PDX1P52945 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.9□□□□□ -1.79
PDX1P52945 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
PDX1P52945 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
PDX1P52945 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
PDX1P52945 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PDX1P52945 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PDX1P52945 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.9□□□□□ -1.79
PDX1P52945 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDX1P52945 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDX1P52945 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PDX1P52945 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.89□□□□□ -1.79
PDX1P52945 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDX1P52945 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.89□□□□□ -1.79
PDX1P52945 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.89□□□□□ -1.79
PDX1P52945 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDX1P52945 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDX1P52945 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDX1P52945 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDX1P52945 SNORA63.1-201ENST00000362493 131 ntBASIC3.89□□□□□ -1.79
PDX1P52945 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PDX1P52945 MIR200C-201ENST00000384980 68 ntBASIC3.89□□□□□ -1.79
PDX1P52945 TAS2R15P-201ENST00000390674 928 ntBASIC3.89□□□□□ -1.79
PDX1P52945 AL590704.1-201ENST00000402856 794 ntBASIC3.89□□□□□ -1.79
PDX1P52945 VPS26BP1-201ENST00000417155 755 ntBASIC3.89□□□□□ -1.79
PDX1P52945 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDX1P52945 AC092447.3-201ENST00000426027 686 ntBASIC3.89□□□□□ -1.79
PDX1P52945 USP9YP11-201ENST00000427537 717 ntBASIC3.89□□□□□ -1.79
PDX1P52945 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.89□□□□□ -1.79
PDX1P52945 RPL31P54-201ENST00000429803 370 ntBASIC3.89□□□□□ -1.79
PDX1P52945 USP9YP31-201ENST00000431405 881 ntBASIC3.89□□□□□ -1.79
PDX1P52945 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDX1P52945 RPS11P1-201ENST00000451072 473 ntBASIC3.89□□□□□ -1.79
PDX1P52945 RPL21P134-201ENST00000453468 483 ntBASIC3.89□□□□□ -1.79
PDX1P52945 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.89□□□□□ -1.79
PDX1P52945 PNPLA4P1-201ENST00000458328 305 ntBASIC3.89□□□□□ -1.79
PDX1P52945 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.89□□□□□ -1.79
PDX1P52945 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.89□□□□□ -1.79
PDX1P52945 RPL37P6-202ENST00000464216 403 ntBASIC3.89□□□□□ -1.79
PDX1P52945 AC010307.1-201ENST00000467206 836 ntBASIC3.89□□□□□ -1.79
PDX1P52945 ACTR3P3-201ENST00000480448 893 ntBASIC3.89□□□□□ -1.79
PDX1P52945 AC006517.1-201ENST00000480485 328 ntBASIC3.89□□□□□ -1.79
PDX1P52945 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.89□□□□□ -1.79
PDX1P52945 BOLA3P3-201ENST00000505182 232 ntBASIC3.89□□□□□ -1.79
PDX1P52945 AC034244.1-201ENST00000507687 207 ntBASIC3.89□□□□□ -1.79
PDX1P52945 AC017037.1-201ENST00000508460 471 ntBASIC3.89□□□□□ -1.79
PDX1P52945 AC016065.2-201ENST00000514530 444 ntBASIC3.89□□□□□ -1.79
PDX1P52945 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.89□□□□□ -1.79
PDX1P52945 OR5M7P-201ENST00000526140 972 ntBASIC3.89□□□□□ -1.79
PDX1P52945 DUXAP5-201ENST00000529668 529 ntBASIC3.89□□□□□ -1.79
PDX1P52945 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.89□□□□□ -1.79
PDX1P52945 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDX1P52945 AC005832.3-201ENST00000537929 631 ntBASIC3.89□□□□□ -1.79
PDX1P52945 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.89□□□□□ -1.79
PDX1P52945 PDCD5P1-201ENST00000543528 309 ntBASIC3.89□□□□□ -1.79
PDX1P52945 AC063950.1-201ENST00000552036 308 ntBASIC3.89□□□□□ -1.79
PDX1P52945 DUXAP6-201ENST00000553858 601 ntBASIC3.89□□□□□ -1.79
PDX1P52945 HMGB3P26-201ENST00000560051 582 ntBASIC3.89□□□□□ -1.79
PDX1P52945 AL132657.2-201ENST00000564417 358 ntBASIC3.89□□□□□ -1.79
PDX1P52945 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.89□□□□□ -1.79
PDX1P52945 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.89□□□□□ -1.79
PDX1P52945 SNORD39.3-201ENST00000584451 71 ntBASIC3.89□□□□□ -1.79
PDX1P52945 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.89□□□□□ -1.79
PDX1P52945 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.89□□□□□ -1.79
PDX1P52945 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.89□□□□□ -1.79
PDX1P52945 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.89□□□□□ -1.79
PDX1P52945 MRPS35P3-201ENST00000603189 709 ntBASIC3.89□□□□□ -1.79
PDX1P52945 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDX1P52945 FP236240.3-201ENST00000623061 327 ntBASIC3.89□□□□□ -1.79
PDX1P52945 AP002782.1-201ENST00000623107 614 ntBASIC3.89□□□□□ -1.79
PDX1P52945 AL512506.2-201ENST00000624472 458 ntBASIC3.89□□□□□ -1.79
PDX1P52945 BMS1P21-201ENST00000634565 365 ntBASIC3.89□□□□□ -1.79
PDX1P52945 MKKS-204ENST00000639674 192 ntBASIC3.89□□□□□ -1.79
PDX1P52945 DBF4P1-201ENST00000412976 1892 ntBASIC3.89□□□□□ -1.79
PDX1P52945 MAPK10-253ENST00000641010 4072 ntBASIC3.89□□□□□ -1.79
PDX1P52945 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDX1P52945 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.89□□□□□ -1.79
PDX1P52945 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
PDX1P52945 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.89□□□□□ -1.79
PDX1P52945 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms