Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RPS12P5-201ENST00000423449 371 ntBASIC5.41□□□□□ -1.54
MRE11P49959 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.41□□□□□ -1.54
MRE11P49959 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
MRE11P49959 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.41□□□□□ -1.54
MRE11P49959 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
MRE11P49959 MTND1P28-201ENST00000435623 950 ntBASIC5.41□□□□□ -1.54
MRE11P49959 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.41□□□□□ -1.54
MRE11P49959 AL354714.3-201ENST00000447284 493 ntBASIC5.41□□□□□ -1.54
MRE11P49959 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.41□□□□□ -1.54
MRE11P49959 snoU13.24-201ENST00000458998 104 ntBASIC5.41□□□□□ -1.54
MRE11P49959 SETP14-201ENST00000497538 873 ntBASIC5.41□□□□□ -1.54
MRE11P49959 AC010350.1-201ENST00000504908 231 ntBASIC5.41□□□□□ -1.54
MRE11P49959 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.41□□□□□ -1.54
MRE11P49959 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.41□□□□□ -1.54
MRE11P49959 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.41□□□□□ -1.54
MRE11P49959 IGKV1-32-201ENST00000519290 311 ntBASIC5.41□□□□□ -1.54
MRE11P49959 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.41□□□□□ -1.54
MRE11P49959 OR5AK1P-201ENST00000524837 922 ntBASIC5.41□□□□□ -1.54
MRE11P49959 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.41□□□□□ -1.54
MRE11P49959 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.41□□□□□ -1.54
MRE11P49959 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.41□□□□□ -1.54
MRE11P49959 POLR2KP1-201ENST00000553226 168 ntBASIC5.41□□□□□ -1.54
MRE11P49959 AC009063.1-201ENST00000563342 702 ntBASIC5.41□□□□□ -1.54
MRE11P49959 BGLT3-201ENST00000564523 994 ntBASIC5.41□□□□□ -1.54
MRE11P49959 AC092325.1-201ENST00000566449 554 ntBASIC5.41□□□□□ -1.54
MRE11P49959 AC091135.1-201ENST00000585943 307 ntBASIC5.41□□□□□ -1.54
MRE11P49959 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
MRE11P49959 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
MRE11P49959 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
MRE11P49959 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
MRE11P49959 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
MRE11P49959 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
MRE11P49959 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.41□□□□□ -1.54
MRE11P49959 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.41□□□□□ -1.54
MRE11P49959 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.4□□□□□ -1.54
MRE11P49959 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
MRE11P49959 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
MRE11P49959 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
MRE11P49959 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
MRE11P49959 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
MRE11P49959 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
MRE11P49959 DDX18P3-201ENST00000404856 2007 ntBASIC5.4□□□□□ -1.54
MRE11P49959 AC090017.1-201ENST00000548612 1779 ntBASIC5.4□□□□□ -1.54
MRE11P49959 AL079343.1-201ENST00000572358 1771 ntBASIC5.4□□□□□ -1.54
MRE11P49959 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.4□□□□□ -1.54
MRE11P49959 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
MRE11P49959 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
MRE11P49959 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
MRE11P49959 AC067945.1-201ENST00000342609 618 ntBASIC5.4□□□□□ -1.54
MRE11P49959 MIR208A-201ENST00000362287 71 ntBASIC5.4□□□□□ -1.54
MRE11P49959 U3.22-201ENST00000391120 215 ntBASIC5.4□□□□□ -1.54
MRE11P49959 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.4□□□□□ -1.54
MRE11P49959 RPL36AP36-201ENST00000418616 301 ntBASIC5.4□□□□□ -1.54
MRE11P49959 LINC00993-201ENST00000420453 540 ntBASIC5.4□□□□□ -1.54
MRE11P49959 IPMKP1-201ENST00000425988 855 ntBASIC5.4□□□□□ -1.54
MRE11P49959 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.4□□□□□ -1.54
MRE11P49959 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.4□□□□□ -1.54
MRE11P49959 UBE2V1P8-201ENST00000437166 265 ntBASIC5.4□□□□□ -1.54
MRE11P49959 HLA-N-201ENST00000437516 135 ntBASIC5.4□□□□□ -1.54
MRE11P49959 AL512286.1-201ENST00000439244 400 ntBASIC5.4□□□□□ -1.54
MRE11P49959 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.4□□□□□ -1.54
MRE11P49959 RPS27AP15-201ENST00000447672 466 ntBASIC5.4□□□□□ -1.54
MRE11P49959 AC000111.2-201ENST00000448200 210 ntBASIC5.4□□□□□ -1.54
MRE11P49959 AL034418.1-201ENST00000448675 860 ntBASIC5.4□□□□□ -1.54
MRE11P49959 TCEA1P1-201ENST00000449716 880 ntBASIC5.4□□□□□ -1.54
MRE11P49959 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.4□□□□□ -1.54
MRE11P49959 AL359385.1-201ENST00000456509 365 ntBASIC5.4□□□□□ -1.54
MRE11P49959 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.4□□□□□ -1.54
MRE11P49959 AK3P4-201ENST00000504283 583 ntBASIC5.4□□□□□ -1.54
MRE11P49959 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.4□□□□□ -1.54
MRE11P49959 RPS4XP20-201ENST00000505751 772 ntBASIC5.4□□□□□ -1.54
MRE11P49959 NPM1P6-201ENST00000521088 871 ntBASIC5.4□□□□□ -1.54
MRE11P49959 IFITM8P-201ENST00000522529 394 ntBASIC5.4□□□□□ -1.54
MRE11P49959 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
MRE11P49959 EEF1B2P4-201ENST00000551398 348 ntBASIC5.4□□□□□ -1.54
MRE11P49959 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.4□□□□□ -1.54
MRE11P49959 RPS3AP4-201ENST00000555161 764 ntBASIC5.4□□□□□ -1.54
MRE11P49959 TPRKBP2-201ENST00000565969 475 ntBASIC5.4□□□□□ -1.54
MRE11P49959 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.4□□□□□ -1.54
MRE11P49959 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.4□□□□□ -1.54
MRE11P49959 AC015871.2-201ENST00000603605 948 ntBASIC5.4□□□□□ -1.54
MRE11P49959 AC024220.1-201ENST00000603675 484 ntBASIC5.4□□□□□ -1.54
MRE11P49959 AL591926.8-201ENST00000616876 211 ntBASIC5.4□□□□□ -1.54
MRE11P49959 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.4□□□□□ -1.54
MRE11P49959 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.4□□□□□ -1.54
MRE11P49959 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.4□□□□□ -1.55
MRE11P49959 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
MRE11P49959 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
MRE11P49959 PABPC1P9-201ENST00000426076 1612 ntBASIC5.4□□□□□ -1.55
MRE11P49959 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
MRE11P49959 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
MRE11P49959 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
MRE11P49959 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
MRE11P49959 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.4□□□□□ -1.55
MRE11P49959 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MRE11P49959 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MRE11P49959 AC090971.4-201ENST00000560291 1800 ntBASIC5.39□□□□□ -1.55
MRE11P49959 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MRE11P49959 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.39□□□□□ -1.55
MRE11P49959 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms