Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC016588.2-201ENST00000632484 3021 ntBASIC4.36□□□□□ -1.71
PTPN9P43378 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTPN9P43378 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTPN9P43378 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN9P43378 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN9P43378 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN9P43378 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PTPN9P43378 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN9P43378 SKINT1L-201ENST00000401057 817 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 RNU2-21P-201ENST00000410368 188 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 AC016397.1-201ENST00000412463 242 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN9P43378 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 CHIAP3-201ENST00000423668 1133 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 NIPA2P1-201ENST00000426223 976 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN9P43378 AC096632.1-201ENST00000427395 310 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN9P43378 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN9P43378 KATNBL1P3-201ENST00000443475 909 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN9P43378 AC097262.1-201ENST00000452559 548 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 USP9YP10-201ENST00000454868 628 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 RPL36AP13-201ENST00000457490 317 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN9P43378 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.35□□□□□ -1.71
PTPN9P43378 RPL5P23-201ENST00000496040 868 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 SNX5P1-201ENST00000505757 1041 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN9P43378 USP9YP5-201ENST00000511770 630 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN9P43378 AC087373.1-201ENST00000524920 491 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN9P43378 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
PTPN9P43378 AL512347.1-201ENST00000566420 503 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 AC022655.2-201ENST00000577280 318 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 MIR3138-201ENST00000585238 82 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 AC006539.2-201ENST00000601729 572 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 AC004987.4-201ENST00000603383 338 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN9P43378 AC080013.6-201ENST00000606185 215 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 AP001521.1-201ENST00000609150 300 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 AC122133.1-201ENST00000613964 233 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 AC068722.2-201ENST00000618734 544 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN9P43378 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN9P43378 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN9P43378 LARP1BP1-201ENST00000506036 1359 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PTPN9P43378 AL592437.2-201ENST00000421655 2434 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN9P43378 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN9P43378 AL133412.1-201ENST00000380194 2992 ntBASIC4.35□□□□□ -1.71
PTPN9P43378 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN9P43378 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN9P43378 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN9P43378 AC022893.2-201ENST00000564832 3296 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN9P43378 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN9P43378 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN9P43378 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN9P43378 RNA5SP388-201ENST00000362584 119 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 SNORA4.1-201ENST00000364263 144 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 RNU6-1122P-201ENST00000384449 107 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 OR6C69P-201ENST00000394268 893 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 RNU2-28P-201ENST00000410457 189 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN9P43378 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN9P43378 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN9P43378 AL035407.1-201ENST00000429211 571 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN9P43378 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN9P43378 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN9P43378 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN9P43378 RPL23AP16-201ENST00000441715 421 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 RPL26P28-201ENST00000451325 435 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN9P43378 IFNWP4-201ENST00000453148 294 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN9P43378 RNU7-125P-201ENST00000458760 62 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 RPL23AP2-201ENST00000471227 466 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 AC087879.1-201ENST00000474343 374 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 RPS3AP43-201ENST00000479743 781 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 NCOR1P1-202ENST00000486162 291 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 AF213884.1-201ENST00000488102 463 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 RPS27AP13-201ENST00000498403 237 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 HMGB1P21-201ENST00000502313 581 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN9P43378 AC093824.1-201ENST00000508796 343 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 XKRY-201ENST00000510392 1100 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN9P43378 RNU6-678P-201ENST00000516832 109 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 AP003730.1-201ENST00000524605 285 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN9P43378 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN9P43378 SNORD39.3-201ENST00000584451 71 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN9P43378 AC110760.3-201ENST00000598794 467 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 IPO5P1-202ENST00000600039 287 ntBASIC4.34□□□□□ -1.71
PTPN9P43378 AP000811.1-201ENST00000603803 651 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms