Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 MIR378J-201ENST00000611988 109 ntBASIC4.27□□□□□ -1.73
USP8P40818 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.27□□□□□ -1.73
USP8P40818 MIR6716-201ENST00000613413 80 ntBASIC4.27□□□□□ -1.73
USP8P40818 AC105227.2-201ENST00000615075 605 ntBASIC4.27□□□□□ -1.73
USP8P40818 AL157770.1-201ENST00000623049 439 ntBASIC4.27□□□□□ -1.73
USP8P40818 AC109454.4-201ENST00000623411 649 ntBASIC4.27□□□□□ -1.73
USP8P40818 AC079416.3-201ENST00000624479 549 ntBASIC4.27□□□□□ -1.73
USP8P40818 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP8P40818 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP8P40818 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP8P40818 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP8P40818 RLIMP1-201ENST00000339626 1680 ntBASIC4.26□□□□□ -1.73
USP8P40818 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.26□□□□□ -1.73
USP8P40818 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP8P40818 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP8P40818 RNA5SP399-201ENST00000364003 117 ntBASIC4.26□□□□□ -1.73
USP8P40818 SNORD6-201ENST00000365444 73 ntBASIC4.26□□□□□ -1.73
USP8P40818 RNU6-317P-201ENST00000384031 107 ntBASIC4.26□□□□□ -1.73
USP8P40818 AC119751.3-201ENST00000399720 670 ntBASIC4.26□□□□□ -1.73
USP8P40818 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.26□□□□□ -1.73
USP8P40818 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.26□□□□□ -1.73
USP8P40818 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.26□□□□□ -1.73
USP8P40818 RPF2P1-201ENST00000424137 906 ntBASIC4.26□□□□□ -1.73
USP8P40818 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.26□□□□□ -1.73
USP8P40818 AL691449.1-201ENST00000426570 421 ntBASIC4.26□□□□□ -1.73
USP8P40818 RPS6P15-201ENST00000431996 751 ntBASIC4.26□□□□□ -1.73
USP8P40818 TBCAP1-201ENST00000436520 327 ntBASIC4.26□□□□□ -1.73
USP8P40818 CBX1P4-201ENST00000439415 457 ntBASIC4.26□□□□□ -1.73
USP8P40818 UBE2V1P5-201ENST00000440070 405 ntBASIC4.26□□□□□ -1.73
USP8P40818 RANP8-201ENST00000444720 713 ntBASIC4.26□□□□□ -1.73
USP8P40818 OR6K5P-201ENST00000447050 945 ntBASIC4.26□□□□□ -1.73
USP8P40818 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.26□□□□□ -1.73
USP8P40818 MRPL35P4-201ENST00000453682 566 ntBASIC4.26□□□□□ -1.73
USP8P40818 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.26□□□□□ -1.73
USP8P40818 RPL7P19-201ENST00000469948 618 ntBASIC4.26□□□□□ -1.73
USP8P40818 AL132838.2-201ENST00000492041 314 ntBASIC4.26□□□□□ -1.73
USP8P40818 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.26□□□□□ -1.73
USP8P40818 AC113347.3-201ENST00000509113 148 ntBASIC4.26□□□□□ -1.73
USP8P40818 Vault.1-201ENST00000516474 102 ntBASIC4.26□□□□□ -1.73
USP8P40818 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.26□□□□□ -1.73
USP8P40818 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.26□□□□□ -1.73
USP8P40818 AC007834.2-201ENST00000536310 343 ntBASIC4.26□□□□□ -1.73
USP8P40818 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.26□□□□□ -1.73
USP8P40818 OSBPL9P5-201ENST00000542581 171 ntBASIC4.26□□□□□ -1.73
USP8P40818 AC023050.2-201ENST00000544968 387 ntBASIC4.26□□□□□ -1.73
USP8P40818 AC008088.1-201ENST00000580993 280 ntBASIC4.26□□□□□ -1.73
USP8P40818 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.26□□□□□ -1.73
USP8P40818 AC010680.4-201ENST00000605334 543 ntBASIC4.26□□□□□ -1.73
USP8P40818 RNU4-89P-201ENST00000607443 133 ntBASIC4.26□□□□□ -1.73
USP8P40818 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.26□□□□□ -1.73
USP8P40818 AC107075.1-201ENST00000613695 314 ntBASIC4.26□□□□□ -1.73
USP8P40818 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.26□□□□□ -1.73
USP8P40818 AL139089.1-201ENST00000620372 975 ntBASIC4.26□□□□□ -1.73
USP8P40818 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP8P40818 AC092608.3-201ENST00000625017 386 ntBASIC4.26□□□□□ -1.73
USP8P40818 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP8P40818 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.26□□□□□ -1.73
USP8P40818 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP8P40818 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP8P40818 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
USP8P40818 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.25□□□□□ -1.73
USP8P40818 DCAF13P3-201ENST00000561147 1334 ntBASIC4.25□□□□□ -1.73
USP8P40818 AP002001.2-201ENST00000529025 1469 ntBASIC4.25□□□□□ -1.73
USP8P40818 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP8P40818 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP8P40818 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP8P40818 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP8P40818 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.25□□□□□ -1.73
USP8P40818 SNORD116-2-201ENST00000384274 95 ntBASIC4.25□□□□□ -1.73
USP8P40818 SNORD116-6-201ENST00000384711 96 ntBASIC4.25□□□□□ -1.73
USP8P40818 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.25□□□□□ -1.73
USP8P40818 AL022722.2-201ENST00000402519 180 ntBASIC4.25□□□□□ -1.73
USP8P40818 AL049693.1-201ENST00000402760 611 ntBASIC4.25□□□□□ -1.73
USP8P40818 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.25□□□□□ -1.73
USP8P40818 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.25□□□□□ -1.73
USP8P40818 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.25□□□□□ -1.73
USP8P40818 COX7BP2-201ENST00000437976 242 ntBASIC4.25□□□□□ -1.73
USP8P40818 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.25□□□□□ -1.73
USP8P40818 HMGB1P37-201ENST00000439613 609 ntBASIC4.25□□□□□ -1.73
USP8P40818 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.25□□□□□ -1.73
USP8P40818 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.25□□□□□ -1.73
USP8P40818 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.25□□□□□ -1.73
USP8P40818 RPL23AP62-201ENST00000463396 453 ntBASIC4.25□□□□□ -1.73
USP8P40818 RPS7P7-201ENST00000463499 571 ntBASIC4.25□□□□□ -1.73
USP8P40818 RPS23P7-201ENST00000466210 444 ntBASIC4.25□□□□□ -1.73
USP8P40818 SNORA3.4-201ENST00000515969 96 ntBASIC4.25□□□□□ -1.73
USP8P40818 RNA5SP179-201ENST00000517284 121 ntBASIC4.25□□□□□ -1.73
USP8P40818 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.25□□□□□ -1.73
USP8P40818 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.25□□□□□ -1.73
USP8P40818 AC091516.1-201ENST00000549191 703 ntBASIC4.25□□□□□ -1.73
USP8P40818 AC090695.1-201ENST00000561269 1222 ntBASIC4.25□□□□□ -1.73
USP8P40818 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.25□□□□□ -1.73
USP8P40818 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.25□□□□□ -1.73
USP8P40818 AC091167.4-201ENST00000605079 184 ntBASIC4.25□□□□□ -1.73
USP8P40818 AL591034.3-201ENST00000605511 685 ntBASIC4.25□□□□□ -1.73
USP8P40818 MIR6867-201ENST00000610636 67 ntBASIC4.25□□□□□ -1.73
USP8P40818 AL592295.2-201ENST00000612578 206 ntBASIC4.25□□□□□ -1.73
USP8P40818 AC099669.2-201ENST00000616549 437 ntBASIC4.25□□□□□ -1.73
USP8P40818 AC006338.2-201ENST00000616864 791 ntBASIC4.25□□□□□ -1.73
USP8P40818 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms