Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MIR7975-201ENST00000619350 68 ntBASIC3.44□□□□□ -1.86
RORAP35398 AC092184.1-201ENST00000625042 715 ntBASIC3.44□□□□□ -1.86
RORAP35398 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RORAP35398 CEP170P1-201ENST00000502249 4587 ntBASIC3.44□□□□□ -1.86
RORAP35398 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RORAP35398 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RORAP35398 MTCO1P12-201ENST00000414273 1543 ntBASIC3.44□□□□□ -1.86
RORAP35398 AL365440.1-201ENST00000436135 2167 ntBASIC3.44□□□□□ -1.86
RORAP35398 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.43□□□□□ -1.86
RORAP35398 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.43□□□□□ -1.86
RORAP35398 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RORAP35398 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RORAP35398 RNU6-792P-201ENST00000363490 107 ntBASIC3.43□□□□□ -1.86
RORAP35398 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RORAP35398 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.43□□□□□ -1.86
RORAP35398 RNU6-1293P-201ENST00000384077 107 ntBASIC3.43□□□□□ -1.86
RORAP35398 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RORAP35398 SNORA11.1-201ENST00000408133 129 ntBASIC3.43□□□□□ -1.86
RORAP35398 RNU2-71P-201ENST00000411395 189 ntBASIC3.43□□□□□ -1.86
RORAP35398 HMGB3P20-201ENST00000417997 600 ntBASIC3.43□□□□□ -1.86
RORAP35398 RPS15AP6-201ENST00000420703 385 ntBASIC3.43□□□□□ -1.86
RORAP35398 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.43□□□□□ -1.86
RORAP35398 AC073063.1-201ENST00000434352 607 ntBASIC3.43□□□□□ -1.86
RORAP35398 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.43□□□□□ -1.86
RORAP35398 MTND4P15-201ENST00000437913 1033 ntBASIC3.43□□□□□ -1.86
RORAP35398 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.43□□□□□ -1.86
RORAP35398 TXNP1-201ENST00000441872 371 ntBASIC3.43□□□□□ -1.86
RORAP35398 AC068135.1-201ENST00000446164 246 ntBASIC3.43□□□□□ -1.86
RORAP35398 AL353718.1-201ENST00000451028 517 ntBASIC3.43□□□□□ -1.86
RORAP35398 RPL12P26-201ENST00000452430 487 ntBASIC3.43□□□□□ -1.86
RORAP35398 RBMY2UP-201ENST00000453474 324 ntBASIC3.43□□□□□ -1.86
RORAP35398 MTND2P30-201ENST00000456663 382 ntBASIC3.43□□□□□ -1.86
RORAP35398 AC010468.1-201ENST00000461022 817 ntBASIC3.43□□□□□ -1.86
RORAP35398 AC104689.1-201ENST00000473356 768 ntBASIC3.43□□□□□ -1.86
RORAP35398 RPL23AP55-201ENST00000498163 452 ntBASIC3.43□□□□□ -1.86
RORAP35398 MTND2P31-201ENST00000512602 616 ntBASIC3.43□□□□□ -1.86
RORAP35398 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.43□□□□□ -1.86
RORAP35398 RN7SKP244-201ENST00000516513 307 ntBASIC3.43□□□□□ -1.86
RORAP35398 SNORA76.2-201ENST00000517095 137 ntBASIC3.43□□□□□ -1.86
RORAP35398 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.43□□□□□ -1.86
RORAP35398 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.43□□□□□ -1.86
RORAP35398 AC103843.2-201ENST00000530523 682 ntBASIC3.43□□□□□ -1.86
RORAP35398 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.43□□□□□ -1.86
RORAP35398 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.43□□□□□ -1.86
RORAP35398 SYF2P1-201ENST00000550658 413 ntBASIC3.43□□□□□ -1.86
RORAP35398 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.43□□□□□ -1.86
RORAP35398 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.43□□□□□ -1.86
RORAP35398 MIR3690-201ENST00000580266 75 ntBASIC3.43□□□□□ -1.86
RORAP35398 RN7SL339P-201ENST00000580597 296 ntBASIC3.43□□□□□ -1.86
RORAP35398 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.43□□□□□ -1.86
RORAP35398 AC012254.4-201ENST00000588843 273 ntBASIC3.43□□□□□ -1.86
RORAP35398 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.43□□□□□ -1.86
RORAP35398 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.43□□□□□ -1.86
RORAP35398 RNU6-156P-201ENST00000621869 107 ntBASIC3.43□□□□□ -1.86
RORAP35398 AL732618.1-201ENST00000623251 301 ntBASIC3.43□□□□□ -1.86
RORAP35398 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.43□□□□□ -1.86
RORAP35398 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.43□□□□□ -1.86
RORAP35398 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RORAP35398 PWAR6-201ENST00000552334 4618 ntBASIC3.43□□□□□ -1.86
RORAP35398 AC011978.2-201ENST00000569835 2054 ntBASIC3.43□□□□□ -1.86
RORAP35398 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
RORAP35398 MTCO1P18-201ENST00000455518 1419 ntBASIC3.43□□□□□ -1.86
RORAP35398 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RORAP35398 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RORAP35398 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RORAP35398 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
RORAP35398 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.42□□□□□ -1.86
RORAP35398 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
RORAP35398 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RORAP35398 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RORAP35398 RNA5SP72-201ENST00000364442 117 ntBASIC3.42□□□□□ -1.86
RORAP35398 Y_RNA.333-201ENST00000365274 102 ntBASIC3.42□□□□□ -1.86
RORAP35398 AC234772.1-201ENST00000377927 937 ntBASIC3.42□□□□□ -1.86
RORAP35398 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.42□□□□□ -1.86
RORAP35398 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RORAP35398 RPS7P15-201ENST00000415804 584 ntBASIC3.42□□□□□ -1.86
RORAP35398 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.42□□□□□ -1.86
RORAP35398 RPL21P109-201ENST00000422213 475 ntBASIC3.42□□□□□ -1.86
RORAP35398 VN1R42P-201ENST00000424651 344 ntBASIC3.42□□□□□ -1.86
RORAP35398 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.42□□□□□ -1.86
RORAP35398 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.42□□□□□ -1.86
RORAP35398 PLGLA-201ENST00000465668 449 ntBASIC3.42□□□□□ -1.86
RORAP35398 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.42□□□□□ -1.86
RORAP35398 WBP1LP4-201ENST00000505043 344 ntBASIC3.42□□□□□ -1.86
RORAP35398 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.42□□□□□ -1.86
RORAP35398 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
RORAP35398 AC010468.3-201ENST00000508225 458 ntBASIC3.42□□□□□ -1.86
RORAP35398 RN7SKP96-201ENST00000516948 297 ntBASIC3.42□□□□□ -1.86
RORAP35398 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.42□□□□□ -1.86
RORAP35398 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.42□□□□□ -1.86
RORAP35398 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.42□□□□□ -1.86
RORAP35398 C1DP5-201ENST00000525775 383 ntBASIC3.42□□□□□ -1.86
RORAP35398 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RORAP35398 MTCYBP41-201ENST00000528913 1123 ntBASIC3.42□□□□□ -1.86
RORAP35398 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.42□□□□□ -1.86
RORAP35398 AC007458.1-201ENST00000542812 373 ntBASIC3.42□□□□□ -1.86
RORAP35398 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.42□□□□□ -1.86
RORAP35398 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.42□□□□□ -1.86
RORAP35398 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.42□□□□□ -1.86
RORAP35398 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms