Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.08□□□□□ -1.76
CPS1P31327 AC007566.2-201ENST00000603642 413 ntBASIC4.08□□□□□ -1.76
CPS1P31327 AC007318.2-201ENST00000620999 243 ntBASIC4.08□□□□□ -1.76
CPS1P31327 PLCE1P1-201ENST00000622094 305 ntBASIC4.08□□□□□ -1.76
CPS1P31327 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CPS1P31327 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CPS1P31327 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CPS1P31327 MTCO1P51-201ENST00000427672 1060 ntBASIC4.07□□□□□ -1.76
CPS1P31327 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.07□□□□□ -1.76
CPS1P31327 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.07□□□□□ -1.76
CPS1P31327 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CPS1P31327 AC008725.1-201ENST00000605123 2263 ntBASIC4.07□□□□□ -1.76
CPS1P31327 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CPS1P31327 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CPS1P31327 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
CPS1P31327 RNU6-618P-201ENST00000363518 112 ntBASIC4.06□□□□□ -1.76
CPS1P31327 AL031736.2-201ENST00000426573 787 ntBASIC4.06□□□□□ -1.76
CPS1P31327 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.06□□□□□ -1.76
CPS1P31327 RPS26P40-201ENST00000435209 294 ntBASIC4.06□□□□□ -1.76
CPS1P31327 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.06□□□□□ -1.76
CPS1P31327 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.06□□□□□ -1.76
CPS1P31327 OR5H3P-201ENST00000502817 919 ntBASIC4.06□□□□□ -1.76
CPS1P31327 RN7SKP31-201ENST00000516354 278 ntBASIC4.06□□□□□ -1.76
CPS1P31327 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.06□□□□□ -1.76
CPS1P31327 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.06□□□□□ -1.76
CPS1P31327 SERPINE4P-201ENST00000554978 281 ntBASIC4.06□□□□□ -1.76
CPS1P31327 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CPS1P31327 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CPS1P31327 AC012020.1-201ENST00000624541 1728 ntBASIC4.06□□□□□ -1.76
CPS1P31327 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.06□□□□□ -1.76
CPS1P31327 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CPS1P31327 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CPS1P31327 AL138878.1-201ENST00000405131 347 ntBASIC4.05□□□□□ -1.76
CPS1P31327 ATF1P1-201ENST00000406040 927 ntBASIC4.05□□□□□ -1.76
CPS1P31327 RNU6ATAC37P-201ENST00000408328 131 ntBASIC4.05□□□□□ -1.76
CPS1P31327 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.05□□□□□ -1.76
CPS1P31327 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.05□□□□□ -1.76
CPS1P31327 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.05□□□□□ -1.76
CPS1P31327 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.05□□□□□ -1.76
CPS1P31327 LINC00901.1-201ENST00000617252 152 ntBASIC4.05□□□□□ -1.76
CPS1P31327 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CPS1P31327 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CPS1P31327 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CPS1P31327 MAPK10-362ENST00000641864 4484 ntBASIC4.05□□□□□ -1.76
CPS1P31327 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.05□□□□□ -1.76
CPS1P31327 MTND5P24-201ENST00000438892 1767 ntBASIC4.05□□□□□ -1.76
CPS1P31327 5S_rRNA.2-201ENST00000391293 112 ntBASIC4.05□□□□□ -1.76
CPS1P31327 MIR1289-2-201ENST00000408360 111 ntBASIC4.05□□□□□ -1.76
CPS1P31327 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CPS1P31327 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.05□□□□□ -1.76
CPS1P31327 RNA5SP458-201ENST00000516188 119 ntBASIC4.05□□□□□ -1.76
CPS1P31327 RNA5SP148-201ENST00000516527 94 ntBASIC4.05□□□□□ -1.76
CPS1P31327 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.05□□□□□ -1.76
CPS1P31327 AL008729.2-201ENST00000606393 473 ntBASIC4.05□□□□□ -1.76
CPS1P31327 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CPS1P31327 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.05□□□□□ -1.76
CPS1P31327 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.04□□□□□ -1.76
CPS1P31327 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CPS1P31327 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CPS1P31327 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CPS1P31327 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CPS1P31327 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CPS1P31327 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CPS1P31327 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.04□□□□□ -1.76
CPS1P31327 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.04□□□□□ -1.76
CPS1P31327 AL590290.1-201ENST00000405336 380 ntBASIC4.04□□□□□ -1.76
CPS1P31327 AMD1P2-201ENST00000412936 992 ntBASIC4.04□□□□□ -1.76
CPS1P31327 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.04□□□□□ -1.76
CPS1P31327 ST13P14-201ENST00000474095 734 ntBASIC4.04□□□□□ -1.76
CPS1P31327 RPS27AP9-201ENST00000477681 438 ntBASIC4.04□□□□□ -1.76
CPS1P31327 AC104027.1-201ENST00000521887 300 ntBASIC4.04□□□□□ -1.76
CPS1P31327 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.04□□□□□ -1.76
CPS1P31327 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.04□□□□□ -1.76
CPS1P31327 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
CPS1P31327 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CPS1P31327 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CPS1P31327 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CPS1P31327 RN7SKP223-201ENST00000410582 62 ntBASIC4.03□□□□□ -1.76
CPS1P31327 AL049610.1-201ENST00000423374 372 ntBASIC4.03□□□□□ -1.76
CPS1P31327 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.03□□□□□ -1.76
CPS1P31327 VWA8P1-201ENST00000510889 176 ntBASIC4.03□□□□□ -1.76
CPS1P31327 FABP5P12-201ENST00000515543 389 ntBASIC4.03□□□□□ -1.76
CPS1P31327 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.03□□□□□ -1.76
CPS1P31327 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.03□□□□□ -1.76
CPS1P31327 AL358913.1-201ENST00000554342 121 ntBASIC4.03□□□□□ -1.76
CPS1P31327 AC018690.1-201ENST00000608144 626 ntBASIC4.03□□□□□ -1.76
CPS1P31327 AL356274.1-201ENST00000617064 410 ntBASIC4.03□□□□□ -1.76
CPS1P31327 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.03□□□□□ -1.76
CPS1P31327 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.03□□□□□ -1.76
CPS1P31327 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CPS1P31327 RNU1-75P-201ENST00000347264 129 ntBASIC4.02□□□□□ -1.77
CPS1P31327 Y_RNA.4-201ENST00000362333 112 ntBASIC4.02□□□□□ -1.77
CPS1P31327 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CPS1P31327 RPS4XP7-201ENST00000406274 780 ntBASIC4.02□□□□□ -1.77
CPS1P31327 AC002524.1-201ENST00000411687 547 ntBASIC4.02□□□□□ -1.77
CPS1P31327 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.02□□□□□ -1.77
CPS1P31327 HMGB3P6-201ENST00000444896 598 ntBASIC4.02□□□□□ -1.77
CPS1P31327 AC112184.1-201ENST00000505179 312 ntBASIC4.02□□□□□ -1.77
CPS1P31327 AC008565.1-201ENST00000509046 885 ntBASIC4.02□□□□□ -1.77
CPS1P31327 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms