Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC067852.4-201ENST00000590314 478 ntBASIC4.56□□□□□ -1.68
TM4SF1P30408 AC245884.10-201ENST00000597355 337 ntBASIC4.56□□□□□ -1.68
TM4SF1P30408 AL445435.1-201ENST00000604232 665 ntBASIC4.56□□□□□ -1.68
TM4SF1P30408 AP003973.1-201ENST00000604639 691 ntBASIC4.56□□□□□ -1.68
TM4SF1P30408 CYCSP41-201ENST00000616920 296 ntBASIC4.56□□□□□ -1.68
TM4SF1P30408 AP006248.2-201ENST00000623309 592 ntBASIC4.56□□□□□ -1.68
TM4SF1P30408 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.56□□□□□ -1.68
TM4SF1P30408 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.56□□□□□ -1.68
TM4SF1P30408 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TM4SF1P30408 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
TM4SF1P30408 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TM4SF1P30408 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.56□□□□□ -1.68
TM4SF1P30408 UBE3AP2-201ENST00000429033 2259 ntBASIC4.56□□□□□ -1.68
TM4SF1P30408 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
TM4SF1P30408 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TM4SF1P30408 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
TM4SF1P30408 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
TM4SF1P30408 AC000367.1-201ENST00000452711 1766 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 MTND4P8-201ENST00000514997 1362 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TM4SF1P30408 ZNF33CP-201ENST00000432492 2030 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
TM4SF1P30408 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TM4SF1P30408 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TM4SF1P30408 RNU4-51P-201ENST00000364206 140 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
TM4SF1P30408 SNORA48.5-201ENST00000391143 135 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 AL121978.1-201ENST00000402778 359 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 AL079342.2-201ENST00000403367 482 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 RNU6-584P-201ENST00000410350 95 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.55□□□□□ -1.68
TM4SF1P30408 HSFY4P-201ENST00000415994 1181 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.55□□□□□ -1.68
TM4SF1P30408 AC027644.1-201ENST00000419595 298 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 RPS15AP40-201ENST00000419621 391 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.55□□□□□ -1.68
TM4SF1P30408 AC069285.2-201ENST00000440210 275 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.55□□□□□ -1.68
TM4SF1P30408 NDUFA5P7-201ENST00000452914 242 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.55□□□□□ -1.68
TM4SF1P30408 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.55□□□□□ -1.68
TM4SF1P30408 AC090071.1-201ENST00000507713 644 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 RNU6-513P-201ENST00000516104 104 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.55□□□□□ -1.68
TM4SF1P30408 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.55□□□□□ -1.68
TM4SF1P30408 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.55□□□□□ -1.68
TM4SF1P30408 OR10V3P-201ENST00000525712 725 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 OR5M7P-201ENST00000526140 972 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.55□□□□□ -1.68
TM4SF1P30408 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.55□□□□□ -1.68
TM4SF1P30408 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TM4SF1P30408 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.55□□□□□ -1.68
TM4SF1P30408 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.55□□□□□ -1.68
TM4SF1P30408 HMGB3P26-201ENST00000560051 582 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 MIR4504-201ENST00000577413 92 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.55□□□□□ -1.68
TM4SF1P30408 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.55□□□□□ -1.68
TM4SF1P30408 AC021749.1-201ENST00000604322 607 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 AC012603.1-201ENST00000606424 528 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 AC069209.1-201ENST00000619282 651 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.55□□□□□ -1.68
TM4SF1P30408 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.55□□□□□ -1.68
TM4SF1P30408 FAM157B-203ENST00000639350 358 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 MTND5P28-201ENST00000438005 1594 ntBASIC4.55□□□□□ -1.68
TM4SF1P30408 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TM4SF1P30408 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TM4SF1P30408 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.55□□□□□ -1.68
TM4SF1P30408 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.55□□□□□ -1.68
TM4SF1P30408 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TM4SF1P30408 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.54□□□□□ -1.68
TM4SF1P30408 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.54□□□□□ -1.68
TM4SF1P30408 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM4SF1P30408 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.54□□□□□ -1.68
TM4SF1P30408 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
TM4SF1P30408 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TM4SF1P30408 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.54□□□□□ -1.68
TM4SF1P30408 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.54□□□□□ -1.68
TM4SF1P30408 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TM4SF1P30408 RNU6-839P-201ENST00000363347 108 ntBASIC4.54□□□□□ -1.68
TM4SF1P30408 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM4SF1P30408 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.54□□□□□ -1.68
TM4SF1P30408 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.54□□□□□ -1.68
TM4SF1P30408 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.54□□□□□ -1.68
TM4SF1P30408 YWHAZP8-201ENST00000436935 731 ntBASIC4.54□□□□□ -1.68
TM4SF1P30408 AC004854.1-201ENST00000440356 349 ntBASIC4.54□□□□□ -1.68
TM4SF1P30408 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.54□□□□□ -1.68
TM4SF1P30408 EXOSC3P1-201ENST00000448649 500 ntBASIC4.54□□□□□ -1.68
TM4SF1P30408 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.54□□□□□ -1.68
TM4SF1P30408 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.54□□□□□ -1.68
TM4SF1P30408 U3.44-201ENST00000458938 192 ntBASIC4.54□□□□□ -1.68
TM4SF1P30408 snoU13.7-201ENST00000459220 104 ntBASIC4.54□□□□□ -1.68
TM4SF1P30408 VPS26AP1-201ENST00000483197 979 ntBASIC4.54□□□□□ -1.68
TM4SF1P30408 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TM4SF1P30408 PHBP14-201ENST00000512887 367 ntBASIC4.54□□□□□ -1.68
TM4SF1P30408 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
TM4SF1P30408 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.54□□□□□ -1.68
TM4SF1P30408 EIF5A2P1-201ENST00000564027 460 ntBASIC4.54□□□□□ -1.68
TM4SF1P30408 AC074051.3-201ENST00000570238 358 ntBASIC4.54□□□□□ -1.68
TM4SF1P30408 AL391001.1-201ENST00000602747 715 ntBASIC4.54□□□□□ -1.68
TM4SF1P30408 AL020997.3-201ENST00000602843 359 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms