Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.76□□□□□ -1.81
PTPN4P29074 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTPN4P29074 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTPN4P29074 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.76□□□□□ -1.81
PTPN4P29074 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PTPN4P29074 RNU6-283P-201ENST00000364788 107 ntBASIC3.76□□□□□ -1.81
PTPN4P29074 MIR607-201ENST00000385241 96 ntBASIC3.76□□□□□ -1.81
PTPN4P29074 RNU6-1176P-201ENST00000390955 107 ntBASIC3.76□□□□□ -1.81
PTPN4P29074 MTCO2P31-201ENST00000402702 684 ntBASIC3.76□□□□□ -1.81
PTPN4P29074 RPL31P2-201ENST00000413849 377 ntBASIC3.76□□□□□ -1.81
PTPN4P29074 AL159169.1-201ENST00000421119 127 ntBASIC3.76□□□□□ -1.81
PTPN4P29074 GOT2P5-201ENST00000433995 546 ntBASIC3.76□□□□□ -1.81
PTPN4P29074 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.76□□□□□ -1.81
PTPN4P29074 NPM1P49-201ENST00000448027 714 ntBASIC3.76□□□□□ -1.81
PTPN4P29074 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.76□□□□□ -1.81
PTPN4P29074 RPS3AP6-201ENST00000484430 795 ntBASIC3.76□□□□□ -1.81
PTPN4P29074 RNF138P1-201ENST00000502765 546 ntBASIC3.76□□□□□ -1.81
PTPN4P29074 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.76□□□□□ -1.81
PTPN4P29074 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.76□□□□□ -1.81
PTPN4P29074 MTCO3P27-201ENST00000514397 196 ntBASIC3.76□□□□□ -1.81
PTPN4P29074 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PTPN4P29074 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.76□□□□□ -1.81
PTPN4P29074 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.76□□□□□ -1.81
PTPN4P29074 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.76□□□□□ -1.81
PTPN4P29074 AC126365.2-201ENST00000580630 379 ntBASIC3.76□□□□□ -1.81
PTPN4P29074 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.76□□□□□ -1.81
PTPN4P29074 RN7SL622P-201ENST00000585292 275 ntBASIC3.76□□□□□ -1.81
PTPN4P29074 AC006116.7-201ENST00000590141 756 ntBASIC3.76□□□□□ -1.81
PTPN4P29074 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.76□□□□□ -1.81
PTPN4P29074 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTPN4P29074 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.76□□□□□ -1.81
PTPN4P29074 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.76□□□□□ -1.81
PTPN4P29074 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTPN4P29074 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.76□□□□□ -1.81
PTPN4P29074 AC005156.1-201ENST00000613371 573 ntBASIC3.76□□□□□ -1.81
PTPN4P29074 AC105227.2-201ENST00000615075 605 ntBASIC3.76□□□□□ -1.81
PTPN4P29074 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.76□□□□□ -1.81
PTPN4P29074 AP003476.1-201ENST00000623984 516 ntBASIC3.76□□□□□ -1.81
PTPN4P29074 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTPN4P29074 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.75□□□□□ -1.81
PTPN4P29074 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN4P29074 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN4P29074 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.75□□□□□ -1.81
PTPN4P29074 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN4P29074 MIR30B-201ENST00000384850 88 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 MIR449B-201ENST00000384995 97 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 RPL22P22-201ENST00000395439 379 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.75□□□□□ -1.81
PTPN4P29074 HSPE1P26-201ENST00000405341 275 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 AC073264.1-201ENST00000411508 416 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN4P29074 AC005517.2-201ENST00000424673 553 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 AC006946.1-201ENST00000429106 328 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 AL050321.1-201ENST00000432363 400 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.75□□□□□ -1.81
PTPN4P29074 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PTPN4P29074 NOTCH2P1-201ENST00000443481 624 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 GXYLT1P1-201ENST00000446657 490 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 AC005002.1-201ENST00000447458 540 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 HMGN1P5-201ENST00000448591 263 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.75□□□□□ -1.81
PTPN4P29074 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.75□□□□□ -1.81
PTPN4P29074 MRPS31P2-201ENST00000451581 518 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 RPL21P104-201ENST00000464143 478 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 AC087879.1-201ENST00000474343 374 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.75□□□□□ -1.81
PTPN4P29074 RPL31P13-201ENST00000484151 370 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 RN7SL323P-201ENST00000494712 295 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 NAMPTP2-201ENST00000505629 1115 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 RNA5SP179-201ENST00000517284 121 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 AC008802.1-201ENST00000519121 791 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.75□□□□□ -1.81
PTPN4P29074 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.75□□□□□ -1.81
PTPN4P29074 AP003102.1-201ENST00000525638 661 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.75□□□□□ -1.81
PTPN4P29074 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.75□□□□□ -1.81
PTPN4P29074 AC068339.2-201ENST00000534395 618 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.75□□□□□ -1.81
PTPN4P29074 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.75□□□□□ -1.81
PTPN4P29074 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.75□□□□□ -1.81
PTPN4P29074 ZNF192P1-203ENST00000565888 810 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.75□□□□□ -1.81
PTPN4P29074 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.75□□□□□ -1.81
PTPN4P29074 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.75□□□□□ -1.81
PTPN4P29074 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.75□□□□□ -1.81
PTPN4P29074 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.75□□□□□ -1.81
PTPN4P29074 AP004247.3-201ENST00000608682 624 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.75□□□□□ -1.81
PTPN4P29074 AC012442.3-202ENST00000636742 206 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.75□□□□□ -1.81
PTPN4P29074 AC006927.2-201ENST00000639256 389 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
PTPN4P29074 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN4P29074 SGO1P1-201ENST00000603525 1447 ntBASIC3.75□□□□□ -1.81
PTPN4P29074 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN4P29074 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.75□□□□□ -1.81
PTPN4P29074 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN4P29074 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN4P29074 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTPN4P29074 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms