Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.68□□□□□ -1.66
CD40P25942 AL360012.1-201ENST00000602813 131 ntBASIC4.68□□□□□ -1.66
CD40P25942 NRBF2P5-201ENST00000603087 788 ntBASIC4.68□□□□□ -1.66
CD40P25942 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.68□□□□□ -1.66
CD40P25942 AC004908.2-201ENST00000609090 574 ntBASIC4.68□□□□□ -1.66
CD40P25942 AC126915.2-201ENST00000610957 190 ntBASIC4.68□□□□□ -1.66
CD40P25942 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.68□□□□□ -1.66
CD40P25942 Y_RNA.804-201ENST00000615262 101 ntBASIC4.68□□□□□ -1.66
CD40P25942 AL359314.1-201ENST00000616913 261 ntBASIC4.68□□□□□ -1.66
CD40P25942 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.68□□□□□ -1.66
CD40P25942 YWHAEP7-203ENST00000622054 312 ntBASIC4.68□□□□□ -1.66
CD40P25942 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.68□□□□□ -1.66
CD40P25942 AP000843.1-201ENST00000624880 701 ntBASIC4.68□□□□□ -1.66
CD40P25942 AP005264.7-201ENST00000625003 745 ntBASIC4.68□□□□□ -1.66
CD40P25942 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.68□□□□□ -1.66
CD40P25942 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.68□□□□□ -1.66
CD40P25942 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.68□□□□□ -1.66
CD40P25942 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD40P25942 AC073544.1-201ENST00000600110 1595 ntBASIC4.68□□□□□ -1.66
CD40P25942 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.68□□□□□ -1.66
CD40P25942 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.68□□□□□ -1.66
CD40P25942 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CD40P25942 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CD40P25942 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.68□□□□□ -1.66
CD40P25942 AC027287.1-201ENST00000553115 1453 ntBASIC4.68□□□□□ -1.66
CD40P25942 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD40P25942 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CD40P25942 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CD40P25942 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD40P25942 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CD40P25942 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD40P25942 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD40P25942 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.67□□□□□ -1.66
CD40P25942 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CD40P25942 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CD40P25942 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD40P25942 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CD40P25942 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD40P25942 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD40P25942 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CD40P25942 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.67□□□□□ -1.66
CD40P25942 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CD40P25942 DHX40P1-201ENST00000588725 1412 ntBASIC4.67□□□□□ -1.66
CD40P25942 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CD40P25942 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CD40P25942 RNU5E-8P-201ENST00000363502 116 ntBASIC4.67□□□□□ -1.66
CD40P25942 Y_RNA.160-201ENST00000363677 92 ntBASIC4.67□□□□□ -1.66
CD40P25942 RNA5SP223-201ENST00000365174 120 ntBASIC4.67□□□□□ -1.66
CD40P25942 SNORD56.6-201ENST00000384569 71 ntBASIC4.67□□□□□ -1.66
CD40P25942 MIR153-1-201ENST00000384914 90 ntBASIC4.67□□□□□ -1.66
CD40P25942 RNU11-4P-201ENST00000391149 133 ntBASIC4.67□□□□□ -1.66
CD40P25942 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CD40P25942 RNU2-62P-201ENST00000410868 191 ntBASIC4.67□□□□□ -1.66
CD40P25942 RNU4-78P-201ENST00000410940 126 ntBASIC4.67□□□□□ -1.66
CD40P25942 RN7SKP247-201ENST00000411094 308 ntBASIC4.67□□□□□ -1.66
CD40P25942 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.67□□□□□ -1.66
CD40P25942 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.67□□□□□ -1.66
CD40P25942 AC092447.6-201ENST00000414578 210 ntBASIC4.67□□□□□ -1.66
CD40P25942 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.67□□□□□ -1.66
CD40P25942 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.67□□□□□ -1.66
CD40P25942 AC093655.2-201ENST00000425735 631 ntBASIC4.67□□□□□ -1.66
CD40P25942 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.67□□□□□ -1.66
CD40P25942 ELOCP18-201ENST00000434209 337 ntBASIC4.67□□□□□ -1.66
CD40P25942 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CD40P25942 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.67□□□□□ -1.66
CD40P25942 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.67□□□□□ -1.66
CD40P25942 AC104651.2-201ENST00000447549 528 ntBASIC4.67□□□□□ -1.66
CD40P25942 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.67□□□□□ -1.66
CD40P25942 AC140076.1-201ENST00000449897 361 ntBASIC4.67□□□□□ -1.66
CD40P25942 MTND1P9-201ENST00000453775 944 ntBASIC4.67□□□□□ -1.66
CD40P25942 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.67□□□□□ -1.66
CD40P25942 HMGB1P25-201ENST00000468402 607 ntBASIC4.67□□□□□ -1.66
CD40P25942 AC092754.1-201ENST00000472975 479 ntBASIC4.67□□□□□ -1.66
CD40P25942 AC114797.1-201ENST00000514003 728 ntBASIC4.67□□□□□ -1.66
CD40P25942 RNU6-410P-201ENST00000517006 107 ntBASIC4.67□□□□□ -1.66
CD40P25942 OR4R1P-201ENST00000529879 463 ntBASIC4.67□□□□□ -1.66
CD40P25942 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.67□□□□□ -1.66
CD40P25942 AP004607.2-201ENST00000533949 322 ntBASIC4.67□□□□□ -1.66
CD40P25942 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.67□□□□□ -1.66
CD40P25942 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.67□□□□□ -1.66
CD40P25942 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.67□□□□□ -1.66
CD40P25942 ADI1P3-201ENST00000549509 470 ntBASIC4.67□□□□□ -1.66
CD40P25942 HIF1AP1-201ENST00000553642 175 ntBASIC4.67□□□□□ -1.66
CD40P25942 RPL10P14-201ENST00000565265 298 ntBASIC4.67□□□□□ -1.66
CD40P25942 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CD40P25942 AC091135.1-201ENST00000585943 307 ntBASIC4.67□□□□□ -1.66
CD40P25942 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.67□□□□□ -1.66
CD40P25942 AL512782.1-201ENST00000603093 364 ntBASIC4.67□□□□□ -1.66
CD40P25942 BNIP3P9-201ENST00000603714 553 ntBASIC4.67□□□□□ -1.66
CD40P25942 AL121612.2-201ENST00000612261 482 ntBASIC4.67□□□□□ -1.66
CD40P25942 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.67□□□□□ -1.66
CD40P25942 AC104985.2-201ENST00000620598 500 ntBASIC4.67□□□□□ -1.66
CD40P25942 AC018445.2-201ENST00000622987 260 ntBASIC4.67□□□□□ -1.66
CD40P25942 AP002505.2-201ENST00000623585 696 ntBASIC4.67□□□□□ -1.66
CD40P25942 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.67□□□□□ -1.66
CD40P25942 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.67□□□□□ -1.66
CD40P25942 AC073869.8-201ENST00000641806 335 ntBASIC4.67□□□□□ -1.66
CD40P25942 AL672167.1-205ENST00000641112 3080 ntBASIC4.67□□□□□ -1.66
CD40P25942 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD40P25942 ZNF680P1-201ENST00000436625 1469 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms