Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AP002371.2-201ENST00000624450 503 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.59□□□□□ -1.83
XRCC1P18887 MIR4496-201ENST00000635896 61 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.59□□□□□ -1.83
XRCC1P18887 AP000553.6-201ENST00000641242 118 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
XRCC1P18887 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.59□□□□□ -1.83
XRCC1P18887 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.59□□□□□ -1.83
XRCC1P18887 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
XRCC1P18887 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
XRCC1P18887 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.59□□□□□ -1.84
XRCC1P18887 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
XRCC1P18887 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.59□□□□□ -1.84
XRCC1P18887 SAGE4P-201ENST00000442271 3381 ntBASIC3.59□□□□□ -1.84
XRCC1P18887 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.58□□□□□ -1.84
XRCC1P18887 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
XRCC1P18887 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
XRCC1P18887 SNORA71.3-201ENST00000362582 128 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 SNORA70E-201ENST00000384492 135 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
XRCC1P18887 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
XRCC1P18887 AL136116.1-201ENST00000403591 381 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.58□□□□□ -1.84
XRCC1P18887 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.58□□□□□ -1.84
XRCC1P18887 RPS15AP40-201ENST00000419621 391 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 AC245054.1-201ENST00000420944 258 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 AC069157.1-201ENST00000421749 137 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 HSPD1P21-201ENST00000436541 245 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.58□□□□□ -1.84
XRCC1P18887 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.58□□□□□ -1.84
XRCC1P18887 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.58□□□□□ -1.84
XRCC1P18887 AL592437.1-201ENST00000443781 492 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 RPS26P56-201ENST00000444468 240 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 SEPT14P24-201ENST00000447236 180 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.58□□□□□ -1.84
XRCC1P18887 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.58□□□□□ -1.84
XRCC1P18887 AC104629.1-201ENST00000494226 508 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 AC012170.1-201ENST00000495139 359 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 FCF1P3-201ENST00000496394 590 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
XRCC1P18887 AC104619.4-201ENST00000510773 249 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.58□□□□□ -1.84
XRCC1P18887 MTCO3P27-201ENST00000514397 196 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 IGKV2-23-201ENST00000518729 323 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 RANP9-201ENST00000519957 271 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 HIGD1AP6-201ENST00000521833 279 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 MTND2P26-201ENST00000528255 1029 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.58□□□□□ -1.84
XRCC1P18887 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.58□□□□□ -1.84
XRCC1P18887 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.58□□□□□ -1.84
XRCC1P18887 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.58□□□□□ -1.84
XRCC1P18887 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.58□□□□□ -1.84
XRCC1P18887 AC133794.1-201ENST00000602731 914 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.58□□□□□ -1.84
XRCC1P18887 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.58□□□□□ -1.84
XRCC1P18887 AL590396.4-201ENST00000636779 956 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.58□□□□□ -1.84
XRCC1P18887 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.58□□□□□ -1.84
XRCC1P18887 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.58□□□□□ -1.84
XRCC1P18887 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
XRCC1P18887 RIOK3P1-201ENST00000418778 1528 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 AL592494.2-201ENST00000425455 1548 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
XRCC1P18887 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.58□□□□□ -1.84
XRCC1P18887 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
XRCC1P18887 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
XRCC1P18887 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.58□□□□□ -1.84
XRCC1P18887 AC107081.3-201ENST00000612715 2034 ntBASIC3.58□□□□□ -1.84
XRCC1P18887 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
XRCC1P18887 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
XRCC1P18887 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
XRCC1P18887 AC016716.1-201ENST00000265882 708 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.57□□□□□ -1.84
XRCC1P18887 MIR153-1-201ENST00000384914 90 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
XRCC1P18887 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
XRCC1P18887 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
XRCC1P18887 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
XRCC1P18887 BTBD10P2-201ENST00000404779 676 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.57□□□□□ -1.84
XRCC1P18887 HMGB1P45-201ENST00000435986 653 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.57□□□□□ -1.84
XRCC1P18887 MTND5P28-201ENST00000438005 1594 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
XRCC1P18887 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 PPIAP3-201ENST00000450588 505 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 TVP23BP2-201ENST00000455082 615 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 AL136097.1-201ENST00000456945 913 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 RPL23AP62-201ENST00000463396 453 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 AP000873.1-201ENST00000463987 400 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.57□□□□□ -1.84
XRCC1P18887 AC146507.1-201ENST00000468335 354 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 AC015908.1-201ENST00000478739 476 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 AC005726.1-201ENST00000494679 427 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
XRCC1P18887 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
XRCC1P18887 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
XRCC1P18887 SNX5P1-201ENST00000505757 1041 ntBASIC3.57□□□□□ -1.84
XRCC1P18887 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms