Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.19□□□□□ -1.58
PTPN1P18031 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.19□□□□□ -1.58
PTPN1P18031 CENPUP2-201ENST00000555897 1186 ntBASIC5.19□□□□□ -1.58
PTPN1P18031 AL390334.1-201ENST00000556395 450 ntBASIC5.19□□□□□ -1.58
PTPN1P18031 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.19□□□□□ -1.58
PTPN1P18031 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.19□□□□□ -1.58
PTPN1P18031 HMGB1P33-201ENST00000563485 527 ntBASIC5.19□□□□□ -1.58
PTPN1P18031 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.19□□□□□ -1.58
PTPN1P18031 MIR4737-201ENST00000583979 81 ntBASIC5.19□□□□□ -1.58
PTPN1P18031 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN1P18031 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN1P18031 PSMA6P4-201ENST00000603247 718 ntBASIC5.19□□□□□ -1.58
PTPN1P18031 AL139286.1-201ENST00000604465 483 ntBASIC5.19□□□□□ -1.58
PTPN1P18031 AC010424.2-201ENST00000607594 443 ntBASIC5.19□□□□□ -1.58
PTPN1P18031 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN1P18031 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.19□□□□□ -1.58
PTPN1P18031 AL022401.1-201ENST00000619498 108 ntBASIC5.19□□□□□ -1.58
PTPN1P18031 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN1P18031 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PTPN1P18031 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN1P18031 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN1P18031 AL022578.1-201ENST00000439330 1433 ntBASIC5.19□□□□□ -1.58
PTPN1P18031 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN1P18031 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN1P18031 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN1P18031 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PTPN1P18031 ZNF652P1-201ENST00000442420 1309 ntBASIC5.19□□□□□ -1.58
PTPN1P18031 AC117529.2-201ENST00000512159 2068 ntBASIC5.19□□□□□ -1.58
PTPN1P18031 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN1P18031 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
PTPN1P18031 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN1P18031 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.19□□□□□ -1.58
PTPN1P18031 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN1P18031 AC104623.2-202ENST00000623477 4002 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN1P18031 RPL23AP57-201ENST00000332361 466 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN1P18031 U8.3-201ENST00000363321 132 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 RNU6-441P-201ENST00000384545 106 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 MIR649-201ENST00000384843 97 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 RNU6-780P-201ENST00000391030 104 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 DHFRP6-201ENST00000401776 268 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 RNA5SP113-201ENST00000410486 84 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 AL133384.1-201ENST00000412744 351 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 TPMTP2-201ENST00000414372 726 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.18□□□□□ -1.58
PTPN1P18031 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.18□□□□□ -1.58
PTPN1P18031 USP9YP36-201ENST00000424581 829 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.18□□□□□ -1.58
PTPN1P18031 NPM1P24-201ENST00000428039 894 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.18□□□□□ -1.58
PTPN1P18031 USP12PX-201ENST00000432383 1057 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 ARPC3P1-201ENST00000437218 533 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.18□□□□□ -1.58
PTPN1P18031 RPL23AP16-201ENST00000441715 421 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 UBE2V1P7-201ENST00000446395 340 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.18□□□□□ -1.58
PTPN1P18031 FABP3P2-201ENST00000453169 399 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 AL354710.1-201ENST00000453641 246 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 RN7SL517P-201ENST00000462240 305 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN1P18031 ARL4AP2-201ENST00000507378 601 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 AC010493.1-201ENST00000513479 292 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 OR7H2P-201ENST00000513483 306 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 snoU109.6-201ENST00000516831 118 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 FAM92A1P1-201ENST00000528023 890 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 AP003122.4-201ENST00000530980 758 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.18□□□□□ -1.58
PTPN1P18031 AL157394.1-201ENST00000562983 1224 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 NRBF2P1-201ENST00000587407 859 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.18□□□□□ -1.58
PTPN1P18031 AC008277.2-201ENST00000605196 797 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.18□□□□□ -1.58
PTPN1P18031 LRRC77P-213ENST00000637727 880 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN1P18031 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.18□□□□□ -1.58
PTPN1P18031 AC100778.3-201ENST00000580060 1750 ntBASIC5.18□□□□□ -1.58
PTPN1P18031 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN1P18031 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PTPN1P18031 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PTPN1P18031 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN1P18031 SDAD1P1-202ENST00000524156 2051 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN1P18031 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN1P18031 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN1P18031 RNA5SP87-201ENST00000384155 118 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 Y_RNA.573-201ENST00000384763 105 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 RNA5SP296-201ENST00000410523 111 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 AC009237.5-201ENST00000414271 501 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 MTATP6P27-201ENST00000416987 621 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.17□□□□□ -1.58
PTPN1P18031 ISCA1P6-201ENST00000427740 390 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.17□□□□□ -1.58
PTPN1P18031 RPS3AP54-201ENST00000435535 734 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 RPL22P17-201ENST00000438729 315 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.17□□□□□ -1.58
PTPN1P18031 Z80107.2-201ENST00000445127 392 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.17□□□□□ -1.58
PTPN1P18031 DPPA3P1-201ENST00000448050 469 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 AC010733.1-201ENST00000451515 401 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms