Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 Z82217.1-201ENST00000625157 8149 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 AC130650.2-201ENST00000618736 2403 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 Y_RNA.192-201ENST00000363977 102 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 RNU6-374P-201ENST00000364146 108 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 Y_RNA.408-201ENST00000383987 102 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 MIR506-201ENST00000384998 124 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 RN7SKP159-201ENST00000410657 292 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 ELOCP9-201ENST00000418624 239 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 AL590399.6-201ENST00000446396 307 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 OFD1P3Y-201ENST00000453312 783 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 SNORA84-201ENST00000459229 133 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 AC092757.1-201ENST00000467293 467 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 AL136126.1-201ENST00000473603 402 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 AC139783.2-201ENST00000504847 1145 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 AC017037.1-201ENST00000508460 471 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 HMGB3P13-201ENST00000511263 607 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 AL389895.1-201ENST00000554127 252 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 AC005412.1-201ENST00000580812 1049 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 AL606490.9-201ENST00000603331 271 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 MTCO1P24-201ENST00000515438 1558 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 PNPT1P2-201ENST00000456768 2050 ntBASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RAB40ALP0C0E4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AC068254.2-201ENST00000623938 3577 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 MIR554-201ENST00000384874 96 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 TAF9BP1-201ENST00000396646 746 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AL355379.1-201ENST00000405542 640 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 JKAMPP1-201ENST00000413804 919 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 HIGD1AP15-201ENST00000416198 280 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AC005517.2-201ENST00000424673 553 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AL035410.1-201ENST00000427409 427 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 USP9YP11-201ENST00000427537 717 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AL050321.1-201ENST00000432363 400 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AC006011.1-201ENST00000442758 349 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 Z73417.1-201ENST00000447373 778 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 RPL36AP13-201ENST00000457490 317 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 SNORD108-201ENST00000459332 71 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AC110792.1-201ENST00000491826 472 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AC012170.1-201ENST00000495139 359 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AP002812.1-201ENST00000495378 474 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 TMEM248P1-201ENST00000510579 951 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 NPM1P41-201ENST00000512920 831 ntBASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.87□□□□□ -1.79
RAB40ALP0C0E4 AC063950.1-201ENST00000552036 308 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms