Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.26□□□□□ -1.57
SNRPA1P09661 Z93242.1-201ENST00000427102 353 ntBASIC5.26□□□□□ -1.57
SNRPA1P09661 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.26□□□□□ -1.57
SNRPA1P09661 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.26□□□□□ -1.57
SNRPA1P09661 RPS4XP4-201ENST00000443195 763 ntBASIC5.26□□□□□ -1.57
SNRPA1P09661 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.26□□□□□ -1.57
SNRPA1P09661 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.26□□□□□ -1.57
SNRPA1P09661 ZNF114P1-201ENST00000453500 292 ntBASIC5.26□□□□□ -1.57
SNRPA1P09661 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.26□□□□□ -1.57
SNRPA1P09661 AC110792.1-201ENST00000491826 472 ntBASIC5.26□□□□□ -1.57
SNRPA1P09661 AP002812.1-201ENST00000495378 474 ntBASIC5.26□□□□□ -1.57
SNRPA1P09661 SETP14-201ENST00000497538 873 ntBASIC5.26□□□□□ -1.57
SNRPA1P09661 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNRPA1P09661 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.26□□□□□ -1.57
SNRPA1P09661 RN7SKP31-201ENST00000516354 278 ntBASIC5.26□□□□□ -1.57
SNRPA1P09661 AP000873.5-201ENST00000533906 236 ntBASIC5.26□□□□□ -1.57
SNRPA1P09661 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNRPA1P09661 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.26□□□□□ -1.57
SNRPA1P09661 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.26□□□□□ -1.57
SNRPA1P09661 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.26□□□□□ -1.57
SNRPA1P09661 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.26□□□□□ -1.57
SNRPA1P09661 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.26□□□□□ -1.57
SNRPA1P09661 AC128687.1-201ENST00000605304 619 ntBASIC5.26□□□□□ -1.57
SNRPA1P09661 AL031775.1-201ENST00000607014 887 ntBASIC5.26□□□□□ -1.57
SNRPA1P09661 AL031667.3-201ENST00000620124 655 ntBASIC5.26□□□□□ -1.57
SNRPA1P09661 AC127502.3-201ENST00000636170 1206 ntBASIC5.26□□□□□ -1.57
SNRPA1P09661 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.26□□□□□ -1.57
SNRPA1P09661 AC105074.1-201ENST00000623380 3095 ntBASIC5.26□□□□□ -1.57
SNRPA1P09661 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SNRPA1P09661 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SNRPA1P09661 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNRPA1P09661 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNRPA1P09661 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNRPA1P09661 AC016588.2-201ENST00000632484 3021 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.25□□□□□ -1.57
SNRPA1P09661 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.25□□□□□ -1.57
SNRPA1P09661 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNRPA1P09661 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 RNU6-619P-201ENST00000365146 108 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNRPA1P09661 AL663109.1-201ENST00000411498 844 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.25□□□□□ -1.57
SNRPA1P09661 AL389915.1-201ENST00000422463 466 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.25□□□□□ -1.57
SNRPA1P09661 AL691449.1-201ENST00000426570 421 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 PPIAP17-201ENST00000438507 471 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 TPTE2P6-202ENST00000445572 1007 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 AC243772.1-201ENST00000451620 410 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 RPL36AP13-201ENST00000457490 317 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 SRRM1P2-201ENST00000464531 1192 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 RPL23AP2-201ENST00000471227 466 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.25□□□□□ -1.57
SNRPA1P09661 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.25□□□□□ -1.57
SNRPA1P09661 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.25□□□□□ -1.57
SNRPA1P09661 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNRPA1P09661 AC004069.2-201ENST00000505438 1114 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 AC093281.2-201ENST00000510153 597 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 KRT19P6-201ENST00000510983 209 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.25□□□□□ -1.57
SNRPA1P09661 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.25□□□□□ -1.57
SNRPA1P09661 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.25□□□□□ -1.57
SNRPA1P09661 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.25□□□□□ -1.57
SNRPA1P09661 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.25□□□□□ -1.57
SNRPA1P09661 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.25□□□□□ -1.57
SNRPA1P09661 HSPE1P5-201ENST00000561489 272 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 AC120057.2-201ENST00000571520 271 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 AP005262.1-201ENST00000582646 997 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 AC110743.1-201ENST00000584870 478 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.25□□□□□ -1.57
SNRPA1P09661 AL390838.2-201ENST00000602394 274 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 AC006363.1-201ENST00000603806 463 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.25□□□□□ -1.57
SNRPA1P09661 MIR6868-201ENST00000611215 58 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNRPA1P09661 AC018755.4-201ENST00000619715 454 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 AC073348.1-201ENST00000623002 331 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNRPA1P09661 AL359740.1-201ENST00000624340 592 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 AC092192.1-201ENST00000633154 1018 ntBASIC5.25□□□□□ -1.57
SNRPA1P09661 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SNRPA1P09661 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
SNRPA1P09661 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNRPA1P09661 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
SNRPA1P09661 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.25□□□□□ -1.57
SNRPA1P09661 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.24□□□□□ -1.57
SNRPA1P09661 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNRPA1P09661 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SNRPA1P09661 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SNRPA1P09661 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SNRPA1P09661 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNRPA1P09661 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNRPA1P09661 Y_RNA.3-201ENST00000362331 103 ntBASIC5.24□□□□□ -1.57
SNRPA1P09661 RNU6-839P-201ENST00000363347 108 ntBASIC5.24□□□□□ -1.57
SNRPA1P09661 Y_RNA.359-201ENST00000365498 102 ntBASIC5.24□□□□□ -1.57
SNRPA1P09661 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SNRPA1P09661 RNU6-213P-201ENST00000384051 104 ntBASIC5.24□□□□□ -1.57
SNRPA1P09661 RNU6-517P-201ENST00000384362 110 ntBASIC5.24□□□□□ -1.57
SNRPA1P09661 Y_RNA.517-201ENST00000384551 106 ntBASIC5.24□□□□□ -1.57
SNRPA1P09661 UBE2V1P10-201ENST00000414685 269 ntBASIC5.24□□□□□ -1.57
SNRPA1P09661 AC073335.1-201ENST00000427776 363 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms