Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 CBX3P2-202ENST00000583365 535 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC4P09017 ZNF92P2-201ENST00000600543 1059 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 AC096947.1-201ENST00000603233 470 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 AC069304.3-201ENST00000603938 1084 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 AC012468.1-201ENST00000604888 430 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 AL392112.1-201ENST00000605115 829 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 AC135178.6-201ENST00000605314 398 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC4P09017 AC006946.3-201ENST00000609791 756 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 CR589904.2-201ENST00000612533 440 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC4P09017 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXC4P09017 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HOXC4P09017 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC4P09017 AC009501.3-201ENST00000605001 1352 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC4P09017 ZNF826P-207ENST00000622273 1910 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 RAD1P1-201ENST00000231383 813 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC4P09017 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.39□□□□□ -1.87
HOXC4P09017 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 AC069218.2-201ENST00000411665 344 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXC4P09017 AC010385.1-201ENST00000412374 256 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 PRELID3BP11-201ENST00000414230 479 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXC4P09017 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXC4P09017 UBE2D3P3-201ENST00000426992 425 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC4P09017 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC4P09017 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXC4P09017 AL357552.1-201ENST00000445254 415 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.39□□□□□ -1.87
HOXC4P09017 MTATP6P14-201ENST00000455189 673 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 SNORD108-201ENST00000459332 71 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 AC004801.2-202ENST00000463559 283 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 AC078857.1-201ENST00000469870 667 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 AC010460.2-201ENST00000509054 677 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 TPT1P8-201ENST00000510120 555 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 AC110792.2-201ENST00000510278 224 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXC4P09017 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC4P09017 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXC4P09017 PTP4A1P6-201ENST00000531034 478 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC4P09017 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC4P09017 AC025260.1-201ENST00000548858 430 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXC4P09017 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC4P09017 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC4P09017 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.39□□□□□ -1.87
HOXC4P09017 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC4P09017 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC4P09017 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC4P09017 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC4P09017 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC4P09017 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXC4P09017 AC022146.1-201ENST00000595307 847 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXC4P09017 AC133794.1-201ENST00000602731 914 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 KATNBL1P5-201ENST00000605015 517 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 AF129408.1-201ENST00000608767 431 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 AC105429.2-201ENST00000610567 517 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 AC097460.3-201ENST00000623099 442 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 AC010608.3-201ENST00000625048 527 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 AL356118.1-201ENST00000635272 1078 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXC4P09017 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXC4P09017 OR6C71P-202ENST00000641886 1107 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC4P09017 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HOXC4P09017 ZNF33CP-201ENST00000432492 2030 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 AL645937.1-201ENST00000641739 1652 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXC4P09017 RIOK3P1-201ENST00000418778 1528 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 AC032011.1-201ENST00000611703 1549 ntBASIC3.39□□□□□ -1.87
HOXC4P09017 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC4P09017 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
HOXC4P09017 METTL21EP-201ENST00000298105 713 ntBASIC3.38□□□□□ -1.87
HOXC4P09017 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HOXC4P09017 RNA5SP387-201ENST00000364226 106 ntBASIC3.38□□□□□ -1.87
HOXC4P09017 SNORA72.3-201ENST00000365074 132 ntBASIC3.38□□□□□ -1.87
HOXC4P09017 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC4P09017 MTATP6P31-201ENST00000406985 692 ntBASIC3.38□□□□□ -1.87
HOXC4P09017 RNA5SP120-201ENST00000410900 112 ntBASIC3.38□□□□□ -1.87
HOXC4P09017 AC069282.1-201ENST00000411911 526 ntBASIC3.38□□□□□ -1.87
HOXC4P09017 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC4P09017 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXC4P09017 HSFY4P-201ENST00000415994 1181 ntBASIC3.38□□□□□ -1.87
HOXC4P09017 OR1AA1P-201ENST00000419597 916 ntBASIC3.38□□□□□ -1.87
HOXC4P09017 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC4P09017 AL121882.1-201ENST00000422893 417 ntBASIC3.38□□□□□ -1.87
HOXC4P09017 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.38□□□□□ -1.87
HOXC4P09017 FO393419.3-201ENST00000428741 282 ntBASIC3.38□□□□□ -1.87
HOXC4P09017 AC005326.1-201ENST00000429197 123 ntBASIC3.38□□□□□ -1.87
HOXC4P09017 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXC4P09017 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms