Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RNY4P24-201ENST00000362735 96 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 RNU6-619P-201ENST00000365146 108 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 RNU1-64P-201ENST00000365443 163 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 RNU6-348P-201ENST00000384386 107 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 AC007066.1-201ENST00000392902 381 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 PPIAP31-201ENST00000405422 495 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 RPS15AP38-201ENST00000413110 372 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DOAP06340 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DOAP06340 AL356095.1-201ENST00000417217 199 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DOAP06340 MTND1P28-201ENST00000435623 950 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DOAP06340 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DOAP06340 NANOGNBP1-201ENST00000448444 480 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DOAP06340 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DOAP06340 OR9M1P-201ENST00000459641 921 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 AC090013.1-201ENST00000485147 480 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 RPS4XP15-201ENST00000489210 795 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 SETP14-201ENST00000497538 873 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 AC138853.1-201ENST00000503549 823 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
HLA-DOAP06340 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.03□□□□□ -1.6
HLA-DOAP06340 RPL7L1P13-201ENST00000511702 739 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DOAP06340 AC134698.5-201ENST00000519444 336 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DOAP06340 AC006064.5-201ENST00000541782 248 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.03□□□□□ -1.6
HLA-DOAP06340 AC090751.1-201ENST00000566966 267 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 AC010487.1-201ENST00000594408 1172 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 AL390816.3-201ENST00000604527 1066 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 NDUFA8P1-201ENST00000605525 367 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 AL109618.2-201ENST00000605527 211 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 AC024560.3-201ENST00000608482 349 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 AC138965.3-201ENST00000623875 498 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 SEPT14P19-203ENST00000633205 211 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 AC008013.2-202ENST00000637965 364 ntBASIC5.03□□□□□ -1.6
HLA-DOAP06340 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DOAP06340 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DOAP06340 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DOAP06340 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DOAP06340 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DOAP06340 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HLA-DOAP06340 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DOAP06340 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DOAP06340 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DOAP06340 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DOAP06340 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DOAP06340 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DOAP06340 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HLA-DOAP06340 EOGT-210ENST00000615922 1931 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DOAP06340 MIR372-201ENST00000362225 67 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 Y_RNA.302-201ENST00000364997 102 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 RPL23AP47-201ENST00000408017 460 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 OR8G2P-201ENST00000412796 908 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DOAP06340 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DOAP06340 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DOAP06340 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DOAP06340 YWHAQP9-201ENST00000445891 512 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 RPS27AP15-201ENST00000447672 466 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 AC093392.2-201ENST00000450682 337 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 RPL23AP35-201ENST00000451906 501 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DOAP06340 RPS29P19-201ENST00000479709 171 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 RPS27P23-201ENST00000487608 251 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DOAP06340 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DOAP06340 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DOAP06340 ARL2BPP4-201ENST00000506854 471 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DOAP06340 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DOAP06340 AC090151.1-201ENST00000520784 730 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DOAP06340 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.02□□□□□ -1.61
HLA-DOAP06340 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DOAP06340 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.02□□□□□ -1.61
HLA-DOAP06340 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.02□□□□□ -1.61
HLA-DOAP06340 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DOAP06340 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DOAP06340 MIR4472-2-201ENST00000582069 67 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 OR4G1P-201ENST00000588632 938 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 AC093227.2-201ENST00000589357 285 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 AL606834.2-201ENST00000602954 668 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 AP000403.1-201ENST00000603349 851 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 MIR6867-201ENST00000610636 67 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DOAP06340 AC023509.5-201ENST00000617434 807 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 AC005609.4-201ENST00000625071 447 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 AC099654.12-201ENST00000639868 649 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DOAP06340 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DOAP06340 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.02□□□□□ -1.61
HLA-DOAP06340 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DOAP06340 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DOAP06340 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms