Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AP000893.1-201ENST00000474462 794 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.05□□□□□ -1.92
HLA-DQB2P05538 TMED11P-201ENST00000479478 690 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 AP000926.3-201ENST00000497201 299 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQB2P05538 OR5H4P-201ENST00000510851 923 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 ACTR6P1-201ENST00000514311 1104 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 RN7SKP272-201ENST00000516988 232 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 RN7SKP57-201ENST00000517248 293 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 AC093331.1-201ENST00000521474 169 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQB2P05538 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQB2P05538 AC025260.1-201ENST00000548858 430 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DQB2P05538 MIR5195-201ENST00000583555 115 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 AC007687.1-201ENST00000602704 304 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 AC138473.1-201ENST00000605717 526 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 AL355816.1-201ENST00000607951 118 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQB2P05538 AL589935.2-201ENST00000616471 1231 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DQB2P05538 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.05□□□□□ -1.92
HLA-DQB2P05538 AC093831.2-201ENST00000624393 3427 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQB2P05538 AC073346.2-201ENST00000624724 2058 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
HLA-DQB2P05538 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DQB2P05538 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 SNORA71.1-201ENST00000364523 117 ntBASIC3.04□□□□□ -1.92
HLA-DQB2P05538 BTF3P9-201ENST00000418784 283 ntBASIC3.04□□□□□ -1.92
HLA-DQB2P05538 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 AL138799.3-201ENST00000438968 350 ntBASIC3.04□□□□□ -1.92
HLA-DQB2P05538 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 SNORD108-201ENST00000459332 71 ntBASIC3.04□□□□□ -1.92
HLA-DQB2P05538 RN7SL633P-201ENST00000488974 297 ntBASIC3.04□□□□□ -1.92
HLA-DQB2P05538 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 PRELID3BP6-201ENST00000503839 571 ntBASIC3.04□□□□□ -1.92
HLA-DQB2P05538 SNX5P1-201ENST00000505757 1041 ntBASIC3.04□□□□□ -1.92
HLA-DQB2P05538 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 AC067904.2-201ENST00000517322 1283 ntBASIC3.04□□□□□ -1.92
HLA-DQB2P05538 AC009812.2-201ENST00000517657 457 ntBASIC3.04□□□□□ -1.92
HLA-DQB2P05538 HIGD1AP18-201ENST00000520730 278 ntBASIC3.04□□□□□ -1.92
HLA-DQB2P05538 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 PSMA2P1-201ENST00000526365 646 ntBASIC3.04□□□□□ -1.92
HLA-DQB2P05538 HIGD1AP10-201ENST00000527837 282 ntBASIC3.04□□□□□ -1.92
HLA-DQB2P05538 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 NF1P5-201ENST00000588287 448 ntBASIC3.04□□□□□ -1.92
HLA-DQB2P05538 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 BNIP3P11-201ENST00000603878 563 ntBASIC3.04□□□□□ -1.92
HLA-DQB2P05538 AC011816.2-201ENST00000607089 556 ntBASIC3.04□□□□□ -1.92
HLA-DQB2P05538 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 AC055764.2-201ENST00000610089 670 ntBASIC3.04□□□□□ -1.92
HLA-DQB2P05538 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-DQB2P05538 AL035425.3-201ENST00000564206 4996 ntBASIC3.03□□□□□ -1.92
HLA-DQB2P05538 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DQB2P05538 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DQB2P05538 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DQB2P05538 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HLA-DQB2P05538 RNA5SP387-201ENST00000364226 106 ntBASIC3.03□□□□□ -1.92
HLA-DQB2P05538 RNU6-244P-201ENST00000391028 104 ntBASIC3.03□□□□□ -1.92
HLA-DQB2P05538 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DQB2P05538 AC007390.1-201ENST00000415722 356 ntBASIC3.03□□□□□ -1.92
HLA-DQB2P05538 KRR1P1-201ENST00000419430 803 ntBASIC3.03□□□□□ -1.92
HLA-DQB2P05538 MTCO1P52-201ENST00000433928 531 ntBASIC3.03□□□□□ -1.92
HLA-DQB2P05538 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQB2P05538 AL157827.1-201ENST00000447622 132 ntBASIC3.03□□□□□ -1.92
HLA-DQB2P05538 RPL37P4-201ENST00000448908 268 ntBASIC3.03□□□□□ -1.92
HLA-DQB2P05538 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQB2P05538 AC068724.1-201ENST00000487100 792 ntBASIC3.03□□□□□ -1.92
HLA-DQB2P05538 CAB39P1-201ENST00000502277 460 ntBASIC3.03□□□□□ -1.92
HLA-DQB2P05538 AC021146.7-201ENST00000509604 775 ntBASIC3.03□□□□□ -1.92
HLA-DQB2P05538 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQB2P05538 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DQB2P05538 AC117525.1-201ENST00000515228 503 ntBASIC3.03□□□□□ -1.92
HLA-DQB2P05538 RNU6-1308P-201ENST00000516817 103 ntBASIC3.03□□□□□ -1.92
HLA-DQB2P05538 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQB2P05538 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQB2P05538 AC037471.2-201ENST00000564941 598 ntBASIC3.03□□□□□ -1.92
HLA-DQB2P05538 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DQB2P05538 ATP5A1P2-202ENST00000616464 443 ntBASIC3.03□□□□□ -1.92
HLA-DQB2P05538 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.03□□□□□ -1.92
HLA-DQB2P05538 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DQB2P05538 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DQB2P05538 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DQB2P05538 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DQB2P05538 AC138649.5-201ENST00000637456 137 ntBASIC3.03□□□□□ -1.92
HLA-DQB2P05538 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DQB2P05538 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DQB2P05538 AL353743.4-201ENST00000422653 1547 ntBASIC3.03□□□□□ -1.92
HLA-DQB2P05538 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms