Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RPL23AP15-201ENST00000450202 459 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AC008280.2-201ENST00000455473 307 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 FTH1P2-201ENST00000466086 412 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AC121161.1-201ENST00000510606 652 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 RN7SKP234-201ENST00000517173 224 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 TRAV37-201ENST00000553906 342 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AC026741.1-201ENST00000605892 482 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AL356118.1-201ENST00000635272 1078 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AC012442.3-202ENST00000636742 206 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AC132825.7-201ENST00000638744 335 ntBASIC3.04□□□□□ -1.92
HLA-DPB1P04440 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DPB1P04440 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 FRG1CP-201ENST00000358464 769 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 SNORA62.3-201ENST00000365110 153 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 OR52E6-202ENST00000379946 954 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 MIR153-1-201ENST00000384914 90 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 RNU2-72P-201ENST00000411175 163 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 AC007899.1-201ENST00000412776 775 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 BX664727.1-201ENST00000416024 466 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 UBE2D3P3-201ENST00000426992 425 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 AC008065.1-201ENST00000428525 348 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 AC233982.1-201ENST00000451247 436 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 AC091564.1-201ENST00000464563 479 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 RPL21P71-201ENST00000465598 459 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 RPS27P23-201ENST00000487608 251 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 AC005351.1-201ENST00000511152 786 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 RPL7L1P13-201ENST00000511702 739 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 RNA5SP380-201ENST00000517190 98 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 AC006116.10-201ENST00000591836 581 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 BNIP3P4-201ENST00000604946 565 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DPB1P04440 AL353746.1-201ENST00000566293 6881 ntBASIC3.03□□□□□ -1.92
HLA-DPB1P04440 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.03□□□□□ -1.93
HLA-DPB1P04440 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 MIR124-3-201ENST00000384866 87 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 PTMAP2-201ENST00000397627 327 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 RSL24D1P1-201ENST00000404972 493 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 RPL32P35-201ENST00000415214 394 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 SYF2P2-201ENST00000417620 583 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 RPS15AP40-201ENST00000419621 391 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 PTP4A1P5-201ENST00000420305 455 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 ELOCP6-201ENST00000429066 328 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 AC005002.1-201ENST00000447458 540 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 ELOCP12-201ENST00000458706 328 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 RPL32P14-201ENST00000463196 378 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 SETP6-201ENST00000479329 568 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms