Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.85□□□□□ -1.79
CHRNA1P02708 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.85□□□□□ -1.79
CHRNA1P02708 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.85□□□□□ -1.79
CHRNA1P02708 VN1R92P-201ENST00000598511 928 ntBASIC3.85□□□□□ -1.79
CHRNA1P02708 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.85□□□□□ -1.79
CHRNA1P02708 RPL21P136-201ENST00000605378 396 ntBASIC3.85□□□□□ -1.79
CHRNA1P02708 AC018754.1-201ENST00000607486 925 ntBASIC3.85□□□□□ -1.79
CHRNA1P02708 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CHRNA1P02708 MIR7112-201ENST00000616126 65 ntBASIC3.85□□□□□ -1.79
CHRNA1P02708 AC121761.2-201ENST00000617300 689 ntBASIC3.85□□□□□ -1.79
CHRNA1P02708 AC018926.3-201ENST00000618841 406 ntBASIC3.85□□□□□ -1.79
CHRNA1P02708 AP003400.6-201ENST00000624698 740 ntBASIC3.85□□□□□ -1.79
CHRNA1P02708 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.85□□□□□ -1.79
CHRNA1P02708 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.85□□□□□ -1.79
CHRNA1P02708 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CHRNA1P02708 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CHRNA1P02708 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CHRNA1P02708 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CHRNA1P02708 AL592494.2-201ENST00000425455 1548 ntBASIC3.85□□□□□ -1.79
CHRNA1P02708 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.85□□□□□ -1.79
CHRNA1P02708 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHRNA1P02708 AC000367.1-201ENST00000452711 1766 ntBASIC3.84□□□□□ -1.79
CHRNA1P02708 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHRNA1P02708 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHRNA1P02708 AP001486.2-201ENST00000561652 5113 ntBASIC3.84□□□□□ -1.79
CHRNA1P02708 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHRNA1P02708 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CHRNA1P02708 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CHRNA1P02708 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHRNA1P02708 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CHRNA1P02708 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHRNA1P02708 NUP35P2-201ENST00000416748 943 ntBASIC3.84□□□□□ -1.79
CHRNA1P02708 HSFY1P1-201ENST00000423928 1178 ntBASIC3.84□□□□□ -1.79
CHRNA1P02708 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.84□□□□□ -1.79
CHRNA1P02708 MTCO1P43-201ENST00000431831 488 ntBASIC3.84□□□□□ -1.79
CHRNA1P02708 AC074367.1-201ENST00000438685 1125 ntBASIC3.84□□□□□ -1.79
CHRNA1P02708 UBE2V1P5-201ENST00000440070 405 ntBASIC3.84□□□□□ -1.79
CHRNA1P02708 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.84□□□□□ -1.79
CHRNA1P02708 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.84□□□□□ -1.79
CHRNA1P02708 AL136097.1-201ENST00000456945 913 ntBASIC3.84□□□□□ -1.79
CHRNA1P02708 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.84□□□□□ -1.79
CHRNA1P02708 RPS29P2-201ENST00000479278 136 ntBASIC3.84□□□□□ -1.79
CHRNA1P02708 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.84□□□□□ -1.79
CHRNA1P02708 AC004069.2-201ENST00000505438 1114 ntBASIC3.84□□□□□ -1.79
CHRNA1P02708 BTF3L4P4-201ENST00000506381 449 ntBASIC3.84□□□□□ -1.79
CHRNA1P02708 AC090071.1-201ENST00000507713 644 ntBASIC3.84□□□□□ -1.79
CHRNA1P02708 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.84□□□□□ -1.79
CHRNA1P02708 RNU6-579P-201ENST00000516879 102 ntBASIC3.84□□□□□ -1.79
CHRNA1P02708 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.84□□□□□ -1.79
CHRNA1P02708 HMGB1P1-201ENST00000522557 636 ntBASIC3.84□□□□□ -1.79
CHRNA1P02708 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.84□□□□□ -1.79
CHRNA1P02708 AC106734.1-201ENST00000568646 663 ntBASIC3.84□□□□□ -1.79
CHRNA1P02708 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.84□□□□□ -1.79
CHRNA1P02708 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.84□□□□□ -1.79
CHRNA1P02708 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.84□□□□□ -1.79
CHRNA1P02708 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.84□□□□□ -1.79
CHRNA1P02708 AL512506.1-201ENST00000613918 449 ntBASIC3.84□□□□□ -1.79
CHRNA1P02708 MIR8057-201ENST00000620957 69 ntBASIC3.84□□□□□ -1.79
CHRNA1P02708 AL732372.2-225ENST00000642124 456 ntBASIC3.84□□□□□ -1.79
CHRNA1P02708 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CHRNA1P02708 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHRNA1P02708 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
CHRNA1P02708 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CHRNA1P02708 AL645937.1-201ENST00000641739 1652 ntBASIC3.84□□□□□ -1.8
CHRNA1P02708 NCAPGP1-201ENST00000505112 1814 ntBASIC3.84□□□□□ -1.8
CHRNA1P02708 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA1P02708 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA1P02708 AP001148.1-201ENST00000624124 2359 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.83□□□□□ -1.8
CHRNA1P02708 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA1P02708 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA1P02708 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA1P02708 MIR423-201ENST00000362201 94 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 Y_RNA.110-201ENST00000363220 99 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 SNORD56.4-201ENST00000363883 71 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA1P02708 RNU4-27P-201ENST00000410889 139 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 AL606495.1-201ENST00000422100 813 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 RPF2P1-201ENST00000424137 906 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.83□□□□□ -1.8
CHRNA1P02708 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.83□□□□□ -1.8
CHRNA1P02708 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.83□□□□□ -1.8
CHRNA1P02708 AC092170.1-201ENST00000440211 356 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.83□□□□□ -1.8
CHRNA1P02708 AC017015.1-201ENST00000477387 286 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.83□□□□□ -1.8
CHRNA1P02708 AC027338.1-201ENST00000514840 825 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 SCARNA13-201ENST00000516672 275 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.83□□□□□ -1.8
CHRNA1P02708 GTF2IP8-201ENST00000560687 584 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 RNA5SP108-201ENST00000605921 117 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.83□□□□□ -1.8
CHRNA1P02708 AC112503.2-201ENST00000609005 552 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 AC096586.1-201ENST00000610267 561 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 AC097460.3-201ENST00000623099 442 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 AC048347.1-201ENST00000624621 427 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 AC092608.3-201ENST00000625017 386 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.83□□□□□ -1.8
CHRNA1P02708 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA1P02708 ZNF833P-201ENST00000424938 1494 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms