Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.26□□□□□ -1.89
SEMA3DO95025 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.26□□□□□ -1.89
SEMA3DO95025 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.26□□□□□ -1.89
SEMA3DO95025 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.26□□□□□ -1.89
SEMA3DO95025 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.26□□□□□ -1.89
SEMA3DO95025 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.26□□□□□ -1.89
SEMA3DO95025 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.26□□□□□ -1.89
SEMA3DO95025 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.26□□□□□ -1.89
SEMA3DO95025 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.26□□□□□ -1.89
SEMA3DO95025 AC067852.3-201ENST00000589177 561 ntBASIC3.26□□□□□ -1.89
SEMA3DO95025 CR392039.5-201ENST00000623201 510 ntBASIC3.26□□□□□ -1.89
SEMA3DO95025 AC012442.3-202ENST00000636742 206 ntBASIC3.26□□□□□ -1.89
SEMA3DO95025 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SEMA3DO95025 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
SEMA3DO95025 AC117529.2-201ENST00000512159 2068 ntBASIC3.26□□□□□ -1.89
SEMA3DO95025 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SEMA3DO95025 MTND4P31-201ENST00000425607 1343 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SEMA3DO95025 AL645937.1-201ENST00000641739 1652 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SEMA3DO95025 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SEMA3DO95025 RNU6-600P-201ENST00000362524 99 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.25□□□□□ -1.89
SEMA3DO95025 AL356057.1-202ENST00000402263 756 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 MTATP6P31-201ENST00000406985 692 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 AC126124.2-201ENST00000413542 321 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 AC234782.4-201ENST00000417646 1048 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 RPL23AP69-201ENST00000431134 458 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 AC073063.1-201ENST00000434352 607 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 HSPD1P21-201ENST00000436541 245 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.25□□□□□ -1.89
SEMA3DO95025 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.25□□□□□ -1.89
SEMA3DO95025 ARL5AP2-201ENST00000444698 533 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 AC125238.1-201ENST00000448842 249 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.25□□□□□ -1.89
SEMA3DO95025 MTND2P6-201ENST00000455337 1030 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 RN7SL542P-201ENST00000467147 294 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 AC093663.2-201ENST00000484625 313 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.25□□□□□ -1.89
SEMA3DO95025 AC111193.1-201ENST00000504097 155 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 FCF1P8-201ENST00000510322 597 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 TMEM248P1-201ENST00000510579 951 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 AC026616.1-201ENST00000523157 525 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.25□□□□□ -1.89
SEMA3DO95025 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.25□□□□□ -1.89
SEMA3DO95025 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.25□□□□□ -1.89
SEMA3DO95025 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.25□□□□□ -1.89
SEMA3DO95025 AC090616.5-202ENST00000582111 297 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SEMA3DO95025 AC015849.2-201ENST00000605738 409 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.25□□□□□ -1.89
SEMA3DO95025 AC003001.2-201ENST00000616294 831 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 AL356863.1-201ENST00000623378 1080 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 AC090617.9-201ENST00000623751 147 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 AC024023.1-201ENST00000624530 922 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SEMA3DO95025 AC004972.1-201ENST00000623934 2209 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.25□□□□□ -1.89
SEMA3DO95025 AC002546.1-201ENST00000588041 2504 ntBASIC3.25□□□□□ -1.89
SEMA3DO95025 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SEMA3DO95025 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SEMA3DO95025 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.24□□□□□ -1.89
SEMA3DO95025 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SEMA3DO95025 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SEMA3DO95025 RPL7P26-201ENST00000333817 754 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 SNORD17-201ENST00000390930 237 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.24□□□□□ -1.89
SEMA3DO95025 AC025750.1-201ENST00000399891 379 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 SKINT1L-201ENST00000401057 817 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 MIR1303-201ENST00000408625 86 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 RNU2-71P-201ENST00000411395 189 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 KCTD10P1-201ENST00000434203 625 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 RPL7P29-201ENST00000437151 728 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.24□□□□□ -1.89
SEMA3DO95025 RPL23AP22-201ENST00000437556 453 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.24□□□□□ -1.89
SEMA3DO95025 AC097499.1-201ENST00000444277 208 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.24□□□□□ -1.89
SEMA3DO95025 CABYRP1-201ENST00000465493 1045 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 AC020898.1-201ENST00000474167 787 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.24□□□□□ -1.89
SEMA3DO95025 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.24□□□□□ -1.89
SEMA3DO95025 MIR2276-201ENST00000516886 89 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 OR4R3P-201ENST00000525084 838 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SEMA3DO95025 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SEMA3DO95025 AC093014.1-201ENST00000548926 724 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.24□□□□□ -1.89
SEMA3DO95025 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.24□□□□□ -1.89
SEMA3DO95025 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.24□□□□□ -1.89
SEMA3DO95025 AP000919.1-202ENST00000581139 1264 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.24□□□□□ -1.89
SEMA3DO95025 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.24□□□□□ -1.89
SEMA3DO95025 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.24□□□□□ -1.89
SEMA3DO95025 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 AC004775.1-201ENST00000607389 753 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 AL118508.4-201ENST00000624142 1176 ntBASIC3.24□□□□□ -1.89
SEMA3DO95025 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.24□□□□□ -1.89
SEMA3DO95025 AC244258.1-201ENST00000637553 1071 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms