Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.11□□□□□ -1.75
GPC4O75487 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
GPC4O75487 DUXAP6-201ENST00000553858 601 ntBASIC4.11□□□□□ -1.75
GPC4O75487 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.11□□□□□ -1.75
GPC4O75487 HIGD1AP17-201ENST00000554576 276 ntBASIC4.11□□□□□ -1.75
GPC4O75487 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.11□□□□□ -1.75
GPC4O75487 TVP23BP1-201ENST00000557500 617 ntBASIC4.11□□□□□ -1.75
GPC4O75487 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.11□□□□□ -1.75
GPC4O75487 LARP7P2-201ENST00000575306 125 ntBASIC4.11□□□□□ -1.75
GPC4O75487 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.11□□□□□ -1.75
GPC4O75487 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.11□□□□□ -1.75
GPC4O75487 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.11□□□□□ -1.75
GPC4O75487 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.11□□□□□ -1.75
GPC4O75487 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.11□□□□□ -1.75
GPC4O75487 AC005962.2-201ENST00000611427 652 ntBASIC4.11□□□□□ -1.75
GPC4O75487 MIR378J-201ENST00000611988 109 ntBASIC4.11□□□□□ -1.75
GPC4O75487 AL445567.2-201ENST00000618935 498 ntBASIC4.11□□□□□ -1.75
GPC4O75487 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
GPC4O75487 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
GPC4O75487 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GPC4O75487 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.11□□□□□ -1.75
GPC4O75487 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
GPC4O75487 LARP1BP1-201ENST00000506036 1359 ntBASIC4.11□□□□□ -1.75
GPC4O75487 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.11□□□□□ -1.75
GPC4O75487 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
GPC4O75487 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
GPC4O75487 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
GPC4O75487 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GPC4O75487 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
GPC4O75487 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
GPC4O75487 AC130650.2-201ENST00000618736 2403 ntBASIC4.1□□□□□ -1.75
GPC4O75487 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
GPC4O75487 FAM133CP-201ENST00000332869 704 ntBASIC4.1□□□□□ -1.75
GPC4O75487 SNRPEP3-201ENST00000338402 276 ntBASIC4.1□□□□□ -1.75
GPC4O75487 MIR383-201ENST00000362257 73 ntBASIC4.1□□□□□ -1.75
GPC4O75487 RNU6-157P-201ENST00000383957 107 ntBASIC4.1□□□□□ -1.75
GPC4O75487 SNORA70E-201ENST00000384492 135 ntBASIC4.1□□□□□ -1.75
GPC4O75487 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
GPC4O75487 AL023807.1-201ENST00000407932 359 ntBASIC4.1□□□□□ -1.75
GPC4O75487 RNU6-757P-201ENST00000410334 100 ntBASIC4.1□□□□□ -1.75
GPC4O75487 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.1□□□□□ -1.75
GPC4O75487 AL139421.1-201ENST00000423010 169 ntBASIC4.1□□□□□ -1.75
GPC4O75487 COX6B1P7-201ENST00000430845 235 ntBASIC4.1□□□□□ -1.75
GPC4O75487 MTND1P32-201ENST00000433043 938 ntBASIC4.1□□□□□ -1.75
GPC4O75487 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.1□□□□□ -1.75
GPC4O75487 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.1□□□□□ -1.75
GPC4O75487 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.1□□□□□ -1.75
GPC4O75487 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.1□□□□□ -1.75
GPC4O75487 NDUFA5P9-201ENST00000472609 340 ntBASIC4.1□□□□□ -1.75
GPC4O75487 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.1□□□□□ -1.75
GPC4O75487 AC105137.1-201ENST00000484355 562 ntBASIC4.1□□□□□ -1.75
GPC4O75487 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.1□□□□□ -1.75
GPC4O75487 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
GPC4O75487 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.1□□□□□ -1.75
GPC4O75487 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.1□□□□□ -1.75
GPC4O75487 IGKV2D-36-201ENST00000518643 226 ntBASIC4.1□□□□□ -1.75
GPC4O75487 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.1□□□□□ -1.75
GPC4O75487 PDCL2P2-201ENST00000533651 189 ntBASIC4.1□□□□□ -1.75
GPC4O75487 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.1□□□□□ -1.75
GPC4O75487 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.1□□□□□ -1.75
GPC4O75487 AC125611.1-201ENST00000549563 229 ntBASIC4.1□□□□□ -1.75
GPC4O75487 LSM6P2-201ENST00000552208 177 ntBASIC4.1□□□□□ -1.75
GPC4O75487 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.1□□□□□ -1.75
GPC4O75487 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
GPC4O75487 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.1□□□□□ -1.75
GPC4O75487 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.1□□□□□ -1.75
GPC4O75487 OR4K7P-201ENST00000580232 945 ntBASIC4.1□□□□□ -1.75
GPC4O75487 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.1□□□□□ -1.75
GPC4O75487 IPO5P1-202ENST00000600039 287 ntBASIC4.1□□□□□ -1.75
GPC4O75487 AL158042.1-201ENST00000605338 460 ntBASIC4.1□□□□□ -1.75
GPC4O75487 HMGB1P50-201ENST00000605814 607 ntBASIC4.1□□□□□ -1.75
GPC4O75487 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.1□□□□□ -1.75
GPC4O75487 AC008083.4-201ENST00000615076 444 ntBASIC4.1□□□□□ -1.75
GPC4O75487 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.1□□□□□ -1.75
GPC4O75487 MIR8059-201ENST00000620427 81 ntBASIC4.1□□□□□ -1.75
GPC4O75487 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.1□□□□□ -1.75
GPC4O75487 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.1□□□□□ -1.75
GPC4O75487 CDR1-202ENST00000625883 1485 ntBASIC4.1□□□□□ -1.75
GPC4O75487 AL359893.1-201ENST00000447628 1580 ntBASIC4.1□□□□□ -1.75
GPC4O75487 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.1□□□□□ -1.75
GPC4O75487 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GPC4O75487 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
GPC4O75487 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.09□□□□□ -1.75
GPC4O75487 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
GPC4O75487 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
GPC4O75487 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
GPC4O75487 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
GPC4O75487 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
GPC4O75487 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
GPC4O75487 SNORA51.6-201ENST00000384151 125 ntBASIC4.09□□□□□ -1.75
GPC4O75487 SNORA37-201ENST00000384504 129 ntBASIC4.09□□□□□ -1.75
GPC4O75487 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
GPC4O75487 ARF4P3-201ENST00000397387 509 ntBASIC4.09□□□□□ -1.75
GPC4O75487 RSL24D1P4-201ENST00000400938 484 ntBASIC4.09□□□□□ -1.75
GPC4O75487 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.09□□□□□ -1.75
GPC4O75487 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.09□□□□□ -1.75
GPC4O75487 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.09□□□□□ -1.75
GPC4O75487 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.09□□□□□ -1.75
GPC4O75487 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
GPC4O75487 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms