Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ACTN4O43707 RNU6-55P-201ENST00000411092 107 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 GJA6P-201ENST00000415117 1042 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 ELOCP20-201ENST00000422460 345 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.87□□□□□ -1.31
ACTN4O43707 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.87□□□□□ -1.31
ACTN4O43707 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
ACTN4O43707 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC6.87□□□□□ -1.31
ACTN4O43707 AL645936.1-201ENST00000441979 518 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 GAPDHP62-201ENST00000515313 990 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 SNORA74.1-201ENST00000516320 180 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 Y_RNA.703-201ENST00000516846 111 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.87□□□□□ -1.31
ACTN4O43707 AC036111.2-201ENST00000533247 901 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.87□□□□□ -1.31
ACTN4O43707 AC106782.4-201ENST00000568264 210 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 COX6CP3-201ENST00000580869 223 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 MIR3941-201ENST00000582572 103 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 AC009779.6-201ENST00000603972 165 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.87□□□□□ -1.31
ACTN4O43707 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.87□□□□□ -1.31
ACTN4O43707 AL138825.1-201ENST00000618587 192 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 MIR6823-201ENST00000622118 61 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.87□□□□□ -1.31
ACTN4O43707 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ACTN4O43707 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ACTN4O43707 AKAP17BP-201ENST00000431706 2719 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ACTN4O43707 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.87□□□□□ -1.31
ACTN4O43707 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
ACTN4O43707 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC6.87□□□□□ -1.31
ACTN4O43707 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ACTN4O43707 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.87□□□□□ -1.31
ACTN4O43707 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.87□□□□□ -1.31
ACTN4O43707 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
ACTN4O43707 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.87□□□□□ -1.31
ACTN4O43707 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ACTN4O43707 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ACTN4O43707 LINC01613-201ENST00000561476 2780 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ACTN4O43707 AC104966.1-201ENST00000467010 1464 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
ACTN4O43707 TRIM51GP-201ENST00000534741 1350 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ACTN4O43707 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ACTN4O43707 Y_RNA.64-201ENST00000362845 102 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 RNU6-1159P-201ENST00000362933 107 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 PRELID1P1-201ENST00000403549 660 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 RNA5SP198-201ENST00000410376 127 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.86□□□□□ -1.31
ACTN4O43707 AC013403.1-201ENST00000436954 263 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 AC234771.2-201ENST00000445718 597 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 RPL23AP60-201ENST00000450011 454 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 AC243772.1-201ENST00000451620 410 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 AC116533.1-201ENST00000459748 321 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 AC040926.1-201ENST00000530195 238 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.86□□□□□ -1.31
ACTN4O43707 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC6.86□□□□□ -1.31
ACTN4O43707 AC084783.1-201ENST00000565846 910 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 AC090615.1-201ENST00000577519 154 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.86□□□□□ -1.31
ACTN4O43707 AC011494.1-201ENST00000596454 237 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ACTN4O43707 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
ACTN4O43707 AC091925.2-201ENST00000625059 256 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 ANKRD36BP1-201ENST00000358576 1779 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
ACTN4O43707 THAP12P4-201ENST00000528321 2266 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ACTN4O43707 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ACTN4O43707 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ACTN4O43707 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.86□□□□□ -1.31
ACTN4O43707 PABPC1P7-201ENST00000413177 1513 ntBASIC6.86□□□□□ -1.31
ACTN4O43707 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
ACTN4O43707 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
ACTN4O43707 AC079753.1-201ENST00000623243 3868 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ACTN4O43707 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
ACTN4O43707 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ACTN4O43707 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ACTN4O43707 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.85□□□□□ -1.31
ACTN4O43707 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ACTN4O43707 Y_RNA.26-201ENST00000362539 101 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 RNA5SP375-201ENST00000362975 119 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 RNU6-280P-201ENST00000364145 104 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.85□□□□□ -1.31
ACTN4O43707 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
ACTN4O43707 PPIAP9-201ENST00000403866 498 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 PRRC2CP1-201ENST00000404428 159 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 BX682237.1-201ENST00000415016 335 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.85□□□□□ -1.31
ACTN4O43707 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.85□□□□□ -1.31
ACTN4O43707 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.85□□□□□ -1.31
ACTN4O43707 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC6.85□□□□□ -1.31
ACTN4O43707 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.85□□□□□ -1.31
ACTN4O43707 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms