Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC068831.8-201ENST00000620171 435 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 MIR8059-201ENST00000620427 81 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 AC024595.1-201ENST00000623088 387 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.32□□□□□ -1.72
SMAD6O43541 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SMAD6O43541 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.32□□□□□ -1.72
SMAD6O43541 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
SMAD6O43541 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.32□□□□□ -1.72
SMAD6O43541 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SMAD6O43541 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SMAD6O43541 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.32□□□□□ -1.72
SMAD6O43541 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.31□□□□□ -1.72
SMAD6O43541 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SMAD6O43541 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SMAD6O43541 AC093311.1-201ENST00000506586 2021 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SMAD6O43541 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SMAD6O43541 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
SMAD6O43541 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.31□□□□□ -1.72
SMAD6O43541 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SMAD6O43541 AL672167.1-206ENST00000356293 943 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 Y_RNA.41-201ENST00000362646 102 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 RNU6-560P-201ENST00000364007 108 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SMAD6O43541 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SMAD6O43541 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SMAD6O43541 HMGB3P18-201ENST00000406327 590 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 FO393419.3-201ENST00000428741 282 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 COX6B1P7-201ENST00000430845 235 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 OR2B8P-201ENST00000432841 938 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 ATP5F1P1-201ENST00000433775 569 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 MTCO1P52-201ENST00000433928 531 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 CDC27P1-201ENST00000445384 715 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SMAD6O43541 ABCF2P2-201ENST00000450549 296 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
SMAD6O43541 AC104164.2-201ENST00000496953 495 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.31□□□□□ -1.72
SMAD6O43541 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.31□□□□□ -1.72
SMAD6O43541 HSPE1P23-201ENST00000509838 286 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 RNU6-1178P-201ENST00000516674 107 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.31□□□□□ -1.72
SMAD6O43541 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.31□□□□□ -1.72
SMAD6O43541 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.31□□□□□ -1.72
SMAD6O43541 AC008083.2-201ENST00000546707 476 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.31□□□□□ -1.72
SMAD6O43541 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.31□□□□□ -1.72
SMAD6O43541 AC007424.1-203ENST00000554613 687 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.31□□□□□ -1.72
SMAD6O43541 AC079171.1-201ENST00000568788 914 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 AC087683.1-201ENST00000591187 441 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.31□□□□□ -1.72
SMAD6O43541 AL591034.3-201ENST00000605511 685 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 AL391497.1-201ENST00000608671 547 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 AC138749.5-201ENST00000611461 208 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 AC243654.2-201ENST00000612843 443 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 AC100793.4-201ENST00000613683 429 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.31□□□□□ -1.72
SMAD6O43541 AC022509.4-201ENST00000621404 572 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.31□□□□□ -1.72
SMAD6O43541 AC244258.1-201ENST00000637553 1071 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.31□□□□□ -1.72
SMAD6O43541 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SMAD6O43541 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.31□□□□□ -1.72
SMAD6O43541 MTCO1P14-201ENST00000441695 1559 ntBASIC4.31□□□□□ -1.72
SMAD6O43541 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.31□□□□□ -1.72
SMAD6O43541 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SMAD6O43541 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMAD6O43541 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMAD6O43541 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
SMAD6O43541 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMAD6O43541 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
SMAD6O43541 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMAD6O43541 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMAD6O43541 RNU1-108P-201ENST00000362556 161 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 RNU1-94P-201ENST00000362627 173 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 RNU6-1119P-201ENST00000384349 108 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 ZNF603P-201ENST00000405613 487 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.3□□□□□ -1.72
SMAD6O43541 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMAD6O43541 PAICSP7-201ENST00000419829 962 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.3□□□□□ -1.72
SMAD6O43541 COX6CP15-201ENST00000426313 211 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 OR5AW1P-201ENST00000426334 1006 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.3□□□□□ -1.72
SMAD6O43541 GTF2IP7-202ENST00000436677 309 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.3□□□□□ -1.72
SMAD6O43541 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.3□□□□□ -1.72
SMAD6O43541 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.3□□□□□ -1.72
SMAD6O43541 AL121877.1-201ENST00000453704 622 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 SUMO2P2-201ENST00000456482 255 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 RPL7P1-201ENST00000468161 747 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 RPL7P9-201ENST00000468715 747 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.3□□□□□ -1.72
SMAD6O43541 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.3□□□□□ -1.72
SMAD6O43541 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
SMAD6O43541 AC091959.2-201ENST00000477363 321 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 AC012158.1-204ENST00000483430 465 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms