Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MEMO1P3-201ENST00000459811 302 ntBASIC4.63□□□□□ -1.67
PROM1O43490 RPL23AP56-201ENST00000460778 453 ntBASIC4.63□□□□□ -1.67
PROM1O43490 RPL9P6-201ENST00000492764 598 ntBASIC4.63□□□□□ -1.67
PROM1O43490 AC023424.2-201ENST00000493479 777 ntBASIC4.63□□□□□ -1.67
PROM1O43490 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.63□□□□□ -1.67
PROM1O43490 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.63□□□□□ -1.67
PROM1O43490 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PROM1O43490 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.63□□□□□ -1.67
PROM1O43490 PAICSP4-201ENST00000517543 1253 ntBASIC4.63□□□□□ -1.67
PROM1O43490 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.63□□□□□ -1.67
PROM1O43490 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.63□□□□□ -1.67
PROM1O43490 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.63□□□□□ -1.67
PROM1O43490 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.63□□□□□ -1.67
PROM1O43490 AC090502.2-201ENST00000549267 280 ntBASIC4.63□□□□□ -1.67
PROM1O43490 AC137800.2-201ENST00000574375 120 ntBASIC4.63□□□□□ -1.67
PROM1O43490 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.63□□□□□ -1.67
PROM1O43490 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.63□□□□□ -1.67
PROM1O43490 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.63□□□□□ -1.67
PROM1O43490 IMMP1LP1-201ENST00000605170 488 ntBASIC4.63□□□□□ -1.67
PROM1O43490 AC010857.1-201ENST00000606398 594 ntBASIC4.63□□□□□ -1.67
PROM1O43490 AC010424.2-201ENST00000607594 443 ntBASIC4.63□□□□□ -1.67
PROM1O43490 AL159169.3-201ENST00000608871 561 ntBASIC4.63□□□□□ -1.67
PROM1O43490 AC008250.2-201ENST00000615261 205 ntBASIC4.63□□□□□ -1.67
PROM1O43490 AL139089.1-201ENST00000620372 975 ntBASIC4.63□□□□□ -1.67
PROM1O43490 AC138649.3-201ENST00000622154 254 ntBASIC4.63□□□□□ -1.67
PROM1O43490 AC000123.2-201ENST00000623124 461 ntBASIC4.63□□□□□ -1.67
PROM1O43490 CR381653.2-201ENST00000624041 768 ntBASIC4.63□□□□□ -1.67
PROM1O43490 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.63□□□□□ -1.67
PROM1O43490 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.63□□□□□ -1.67
PROM1O43490 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PROM1O43490 AC099654.2-201ENST00000433031 1980 ntBASIC4.63□□□□□ -1.67
PROM1O43490 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PROM1O43490 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PROM1O43490 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PROM1O43490 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PROM1O43490 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.63□□□□□ -1.67
PROM1O43490 AC009643.2-201ENST00000603543 1448 ntBASIC4.63□□□□□ -1.67
PROM1O43490 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PROM1O43490 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PROM1O43490 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.62□□□□□ -1.67
PROM1O43490 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
PROM1O43490 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.62□□□□□ -1.67
PROM1O43490 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
PROM1O43490 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PROM1O43490 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
PROM1O43490 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PROM1O43490 INTS6P1-201ENST00000504674 2530 ntBASIC4.62□□□□□ -1.67
PROM1O43490 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
PROM1O43490 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PROM1O43490 SNRPEP3-201ENST00000338402 276 ntBASIC4.62□□□□□ -1.67
PROM1O43490 RNU6-297P-201ENST00000384636 107 ntBASIC4.62□□□□□ -1.67
PROM1O43490 MIR506-201ENST00000384998 124 ntBASIC4.62□□□□□ -1.67
PROM1O43490 U8.14-201ENST00000390843 143 ntBASIC4.62□□□□□ -1.67
PROM1O43490 RPL17P50-201ENST00000396131 546 ntBASIC4.62□□□□□ -1.67
PROM1O43490 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PROM1O43490 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PROM1O43490 AC073264.1-201ENST00000411508 416 ntBASIC4.62□□□□□ -1.67
PROM1O43490 CHEK2P3-201ENST00000416118 248 ntBASIC4.62□□□□□ -1.67
PROM1O43490 AC233981.1-201ENST00000423224 461 ntBASIC4.62□□□□□ -1.67
PROM1O43490 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.62□□□□□ -1.67
PROM1O43490 AL356583.2-201ENST00000426536 280 ntBASIC4.62□□□□□ -1.67
PROM1O43490 AL031736.2-201ENST00000426573 787 ntBASIC4.62□□□□□ -1.67
PROM1O43490 RPL37P21-201ENST00000435890 276 ntBASIC4.62□□□□□ -1.67
PROM1O43490 AC122718.1-201ENST00000439448 744 ntBASIC4.62□□□□□ -1.67
PROM1O43490 MTND4P25-201ENST00000441039 533 ntBASIC4.62□□□□□ -1.67
PROM1O43490 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.62□□□□□ -1.67
PROM1O43490 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PROM1O43490 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.62□□□□□ -1.67
PROM1O43490 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.62□□□□□ -1.67
PROM1O43490 USP9YP12-201ENST00000450481 570 ntBASIC4.62□□□□□ -1.67
PROM1O43490 AL033528.1-201ENST00000453780 140 ntBASIC4.62□□□□□ -1.67
PROM1O43490 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.62□□□□□ -1.67
PROM1O43490 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PROM1O43490 FAM133DP-201ENST00000464802 691 ntBASIC4.62□□□□□ -1.67
PROM1O43490 RPL5P30-201ENST00000465511 891 ntBASIC4.62□□□□□ -1.67
PROM1O43490 RPL31P58-201ENST00000469001 379 ntBASIC4.62□□□□□ -1.67
PROM1O43490 RPS3AP17-201ENST00000472594 777 ntBASIC4.62□□□□□ -1.67
PROM1O43490 AC017015.1-201ENST00000477387 286 ntBASIC4.62□□□□□ -1.67
PROM1O43490 AC108941.1-201ENST00000502853 530 ntBASIC4.62□□□□□ -1.67
PROM1O43490 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.62□□□□□ -1.67
PROM1O43490 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.62□□□□□ -1.67
PROM1O43490 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.62□□□□□ -1.67
PROM1O43490 AC026412.2-201ENST00000512270 1075 ntBASIC4.62□□□□□ -1.67
PROM1O43490 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.62□□□□□ -1.67
PROM1O43490 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PROM1O43490 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.62□□□□□ -1.67
PROM1O43490 AC008033.2-201ENST00000542626 177 ntBASIC4.62□□□□□ -1.67
PROM1O43490 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.62□□□□□ -1.67
PROM1O43490 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.62□□□□□ -1.67
PROM1O43490 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.62□□□□□ -1.67
PROM1O43490 SERPINE4P-201ENST00000554978 281 ntBASIC4.62□□□□□ -1.67
PROM1O43490 AC006960.3-201ENST00000561845 705 ntBASIC4.62□□□□□ -1.67
PROM1O43490 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.62□□□□□ -1.67
PROM1O43490 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PROM1O43490 BNIP3P8-201ENST00000597863 560 ntBASIC4.62□□□□□ -1.67
PROM1O43490 AP000403.1-201ENST00000603349 851 ntBASIC4.62□□□□□ -1.67
PROM1O43490 AP001521.1-201ENST00000609150 300 ntBASIC4.62□□□□□ -1.67
PROM1O43490 AC243773.3-201ENST00000613270 256 ntBASIC4.62□□□□□ -1.67
PROM1O43490 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.62□□□□□ -1.67
PROM1O43490 AL157786.1-207ENST00000627771 695 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms