Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.43□□□□□ -1.86
LSM1O15116 OR8R1P-201ENST00000543943 764 ntBASIC3.43□□□□□ -1.86
LSM1O15116 TGIF1P1-201ENST00000558095 802 ntBASIC3.43□□□□□ -1.86
LSM1O15116 AGGF1P6-201ENST00000569213 976 ntBASIC3.43□□□□□ -1.86
LSM1O15116 AC017100.2-201ENST00000584628 355 ntBASIC3.43□□□□□ -1.86
LSM1O15116 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.43□□□□□ -1.86
LSM1O15116 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.43□□□□□ -1.86
LSM1O15116 AC007566.2-201ENST00000603642 413 ntBASIC3.43□□□□□ -1.86
LSM1O15116 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.43□□□□□ -1.86
LSM1O15116 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LSM1O15116 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LSM1O15116 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.43□□□□□ -1.86
LSM1O15116 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LSM1O15116 AC004972.1-201ENST00000623934 2209 ntBASIC3.43□□□□□ -1.86
LSM1O15116 AL355578.1-201ENST00000607405 1328 ntBASIC3.43□□□□□ -1.86
LSM1O15116 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.42□□□□□ -1.86
LSM1O15116 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
LSM1O15116 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LSM1O15116 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LSM1O15116 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.42□□□□□ -1.86
LSM1O15116 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LSM1O15116 AC116096.1-201ENST00000566804 2314 ntBASIC3.42□□□□□ -1.86
LSM1O15116 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.42□□□□□ -1.86
LSM1O15116 RNU6-796P-201ENST00000391086 107 ntBASIC3.42□□□□□ -1.86
LSM1O15116 RPL32P23-201ENST00000397237 405 ntBASIC3.42□□□□□ -1.86
LSM1O15116 SNORA11C-201ENST00000408532 129 ntBASIC3.42□□□□□ -1.86
LSM1O15116 RN7SKP156-201ENST00000410308 342 ntBASIC3.42□□□□□ -1.86
LSM1O15116 RNU6-628P-201ENST00000410675 107 ntBASIC3.42□□□□□ -1.86
LSM1O15116 RNU6-55P-201ENST00000411092 107 ntBASIC3.42□□□□□ -1.86
LSM1O15116 RNU6-954P-201ENST00000411355 107 ntBASIC3.42□□□□□ -1.86
LSM1O15116 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
LSM1O15116 AC068533.1-201ENST00000418542 415 ntBASIC3.42□□□□□ -1.86
LSM1O15116 VDAC1P3-201ENST00000434069 851 ntBASIC3.42□□□□□ -1.86
LSM1O15116 HMGN2P20-201ENST00000437531 273 ntBASIC3.42□□□□□ -1.86
LSM1O15116 TRIM60P18-201ENST00000441518 828 ntBASIC3.42□□□□□ -1.86
LSM1O15116 HSPE1P28-201ENST00000443139 211 ntBASIC3.42□□□□□ -1.86
LSM1O15116 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.42□□□□□ -1.86
LSM1O15116 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.42□□□□□ -1.86
LSM1O15116 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.42□□□□□ -1.86
LSM1O15116 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.42□□□□□ -1.86
LSM1O15116 DNAJC19P8-201ENST00000452887 259 ntBASIC3.42□□□□□ -1.86
LSM1O15116 NF1P3-201ENST00000457709 450 ntBASIC3.42□□□□□ -1.86
LSM1O15116 RN7SL594P-201ENST00000470590 287 ntBASIC3.42□□□□□ -1.86
LSM1O15116 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
LSM1O15116 AC012181.1-201ENST00000479895 423 ntBASIC3.42□□□□□ -1.86
LSM1O15116 SETP14-201ENST00000497538 873 ntBASIC3.42□□□□□ -1.86
LSM1O15116 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.42□□□□□ -1.86
LSM1O15116 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.42□□□□□ -1.86
LSM1O15116 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.42□□□□□ -1.86
LSM1O15116 RANP9-201ENST00000519957 271 ntBASIC3.42□□□□□ -1.86
LSM1O15116 AC068657.1-201ENST00000520807 306 ntBASIC3.42□□□□□ -1.86
LSM1O15116 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
LSM1O15116 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.42□□□□□ -1.86
LSM1O15116 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.42□□□□□ -1.86
LSM1O15116 DUXAP6-201ENST00000553858 601 ntBASIC3.42□□□□□ -1.86
LSM1O15116 AC040174.2-201ENST00000602701 465 ntBASIC3.42□□□□□ -1.86
LSM1O15116 AC079880.2-201ENST00000603790 1213 ntBASIC3.42□□□□□ -1.86
LSM1O15116 AL357559.1-201ENST00000622228 274 ntBASIC3.42□□□□□ -1.86
LSM1O15116 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.42□□□□□ -1.86
LSM1O15116 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
LSM1O15116 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
LSM1O15116 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.42□□□□□ -1.86
LSM1O15116 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
LSM1O15116 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LSM1O15116 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LSM1O15116 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LSM1O15116 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LSM1O15116 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LSM1O15116 RNA5SP27-201ENST00000363839 119 ntBASIC3.41□□□□□ -1.86
LSM1O15116 RNU6-629P-201ENST00000384061 103 ntBASIC3.41□□□□□ -1.86
LSM1O15116 RN7SKP53-201ENST00000411337 315 ntBASIC3.41□□□□□ -1.86
LSM1O15116 RPS3AP9-201ENST00000417027 792 ntBASIC3.41□□□□□ -1.86
LSM1O15116 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.41□□□□□ -1.86
LSM1O15116 FTH1P1-201ENST00000437933 532 ntBASIC3.41□□□□□ -1.86
LSM1O15116 AC093392.2-201ENST00000450682 337 ntBASIC3.41□□□□□ -1.86
LSM1O15116 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LSM1O15116 AC104308.1-201ENST00000454621 333 ntBASIC3.41□□□□□ -1.86
LSM1O15116 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.41□□□□□ -1.86
LSM1O15116 AC007967.1-201ENST00000455422 1159 ntBASIC3.41□□□□□ -1.86
LSM1O15116 TPRKBP1-201ENST00000456243 481 ntBASIC3.41□□□□□ -1.86
LSM1O15116 AC087879.1-201ENST00000474343 374 ntBASIC3.41□□□□□ -1.86
LSM1O15116 RPS27AP1-201ENST00000475545 471 ntBASIC3.41□□□□□ -1.86
LSM1O15116 AC007688.1-201ENST00000475592 759 ntBASIC3.41□□□□□ -1.86
LSM1O15116 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.41□□□□□ -1.86
LSM1O15116 AC093663.1-201ENST00000497190 394 ntBASIC3.41□□□□□ -1.86
LSM1O15116 AC020893.1-201ENST00000502452 580 ntBASIC3.41□□□□□ -1.86
LSM1O15116 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.41□□□□□ -1.86
LSM1O15116 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.41□□□□□ -1.86
LSM1O15116 AP000619.3-201ENST00000535634 1127 ntBASIC3.41□□□□□ -1.86
LSM1O15116 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.41□□□□□ -1.86
LSM1O15116 CR383656.14-201ENST00000551951 406 ntBASIC3.41□□□□□ -1.86
LSM1O15116 AC034268.2-201ENST00000571784 482 ntBASIC3.41□□□□□ -1.86
LSM1O15116 OR4G1P-201ENST00000588632 938 ntBASIC3.41□□□□□ -1.86
LSM1O15116 AL133393.1-201ENST00000603277 287 ntBASIC3.41□□□□□ -1.86
LSM1O15116 AL450270.1-201ENST00000606160 391 ntBASIC3.41□□□□□ -1.86
LSM1O15116 AC021851.1-201ENST00000608537 1082 ntBASIC3.41□□□□□ -1.86
LSM1O15116 AC006023.2-201ENST00000609916 167 ntBASIC3.41□□□□□ -1.86
LSM1O15116 AL109659.3-201ENST00000624985 950 ntBASIC3.41□□□□□ -1.86
LSM1O15116 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.41□□□□□ -1.86
LSM1O15116 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms