Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RPL7P1-201ENST00000468161 747 ntBASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AC146507.1-201ENST00000468335 354 ntBASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 RPL7P9-201ENST00000468715 747 ntBASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AC011979.1-201ENST00000472300 483 ntBASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 OR4G11P-201ENST00000492842 939 ntBASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AC025445.1-201ENST00000502728 300 ntBASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AC110760.3-202ENST00000515177 371 ntBASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 RNU6-1225P-201ENST00000516336 65 ntBASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AC091946.2-201ENST00000606105 291 ntBASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AL513477.2-201ENST00000607858 568 ntBASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AC005332.6-201ENST00000613178 446 ntBASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AL392048.1-201ENST00000613946 534 ntBASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AC091046.2-201ENST00000620775 665 ntBASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AC068787.1-201ENST00000623908 691 ntBASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 MKKS-204ENST00000639674 192 ntBASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AL359893.1-201ENST00000447628 1580 ntBASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AC109315.1-201ENST00000584143 1347 ntBASIC3.7□□□□□ -1.82
NPIPA3F8WFD2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 RNU5D-1-201ENST00000363299 116 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 RNVU1-3-201ENST00000364313 161 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 RNU6-636P-201ENST00000384598 107 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 CYCSP19-201ENST00000411715 316 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AL133384.1-201ENST00000412744 351 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 SSR1P2-201ENST00000415208 787 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AL035410.1-201ENST00000427409 427 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 HMGB3P5-201ENST00000428894 612 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 BMS1P19-201ENST00000433925 393 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 MTCO1P48-201ENST00000448024 1096 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 RFC5P1-201ENST00000454419 874 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 TRBV26-201ENST00000456572 344 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 RN7SL542P-201ENST00000467147 294 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AC006517.1-201ENST00000480485 328 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 MTCO3P35-201ENST00000485582 781 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 MTCYBP16-201ENST00000509187 1129 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AC008837.2-201ENST00000513076 418 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 FTH1P9-201ENST00000513251 355 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 RNU6-1261P-201ENST00000517194 104 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 RNU4-60P-201ENST00000517239 135 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AC027309.2-201ENST00000520566 192 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 OR6C73P-201ENST00000546432 358 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 SULT1C2P1-202ENST00000562418 459 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 RN7SL703P-201ENST00000578485 302 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AC005255.1-201ENST00000593748 216 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AC068790.5-201ENST00000602741 355 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AL450336.1-201ENST00000605180 586 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 MIR92B-201ENST00000607575 96 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AC023158.2-201ENST00000614876 543 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AC090246.1-201ENST00000616499 426 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AC073348.1-201ENST00000623002 331 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AP001002.2-201ENST00000625137 386 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms