Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SSXP10-201ENST00000402595 565 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 RPL7P8-201ENST00000411964 730 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 Z99497.1-201ENST00000421282 135 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 MTCO2P16-201ENST00000436962 677 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 MTND4P6-201ENST00000438297 472 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 HMGB3P9-201ENST00000441799 583 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 TAF9P1-201ENST00000445421 515 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 AC114755.5-201ENST00000447760 831 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 MTND1P29-201ENST00000448112 647 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 TAF9P2-201ENST00000454958 515 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 MTND4LP3-201ENST00000468320 276 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 AC090013.1-201ENST00000485147 480 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 AC109486.1-201ENST00000486833 374 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 RN7SL812P-201ENST00000493791 279 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 TMEM251P1-201ENST00000503717 318 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 AC114981.1-201ENST00000503897 678 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 DSTNP2-201ENST00000504533 515 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 RN7SKP82-201ENST00000516786 223 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 AC022790.1-201ENST00000522872 204 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 TVP23BP1-201ENST00000557500 617 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 HSPE1P3-201ENST00000559254 309 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 AC136618.2-201ENST00000575091 400 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 AC004987.4-201ENST00000603383 338 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 BNIP3P11-201ENST00000603878 563 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 AL356266.1-201ENST00000623311 483 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 AL356596.1-201ENST00000624230 379 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 AC140479.6-201ENST00000633535 357 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 FAM157B-203ENST00000639350 358 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 AC093535.2-201ENST00000624769 2326 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 MAPK10-303ENST00000641324 3959 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 DDX43P2-201ENST00000604753 1354 ntBASIC4.4□□□□□ -1.71
TBC1D3FA6NER0 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 AL158163.1-201ENST00000603915 1649 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 SAGE4P-201ENST00000442271 3381 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 AC027290.2-201ENST00000623210 18662 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 AP002907.1-201ENST00000606361 1430 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 LINC01355-201ENST00000566551 5444 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 MIR383-201ENST00000362257 73 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 Y_RNA.51-201ENST00000362725 102 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 ENSAP1-201ENST00000392855 326 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 AC007066.1-201ENST00000392902 381 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 AL121972.1-201ENST00000402023 252 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 BTBD10P2-201ENST00000404779 676 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 AL512430.2-201ENST00000406786 339 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 RN7SKP263-201ENST00000411194 309 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 OR8G2P-201ENST00000412796 908 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 BTF3L4P1-201ENST00000413813 468 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 AC004987.3-201ENST00000413879 771 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 AL139095.3-201ENST00000419672 1203 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 AC004448.2-201ENST00000422360 586 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 AL132765.1-201ENST00000434165 553 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 UBE2FP3-201ENST00000436366 524 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 AL117351.1-201ENST00000438864 766 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 RPL23AP52-201ENST00000439311 478 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 UBE2V1P3-201ENST00000439651 417 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 KATNBL1P6-201ENST00000453433 915 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 ZNF114P1-201ENST00000453500 292 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 AC026410.2-201ENST00000460281 156 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 RPL30P9-201ENST00000465586 330 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 RPL7P19-201ENST00000469948 618 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 AC041039.1-201ENST00000485656 536 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 AC108941.1-201ENST00000502853 530 ntBASIC4.39□□□□□ -1.71
TBC1D3FA6NER0 AC108475.1-201ENST00000507880 950 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms