Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 HSFY4P-201ENST00000415994 1181 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AL590139.1-201ENST00000416267 400 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 BMS1P19-201ENST00000433925 393 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 LYPLA1P1-201ENST00000434514 622 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 MTND1P30-201ENST00000441241 901 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AL512326.1-201ENST00000443050 721 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 snoU13.7-201ENST00000459220 104 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 RPL5P22-201ENST00000480199 884 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AK3P4-201ENST00000504283 583 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 RNA5SP73-201ENST00000516744 108 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 MYL12AP1-201ENST00000518490 515 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AC063950.1-201ENST00000552036 308 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 LSM6P2-201ENST00000552208 177 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AC051619.2-201ENST00000559063 397 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 HSPE1P3-201ENST00000559254 309 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 MIR4637-201ENST00000582405 84 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AC068790.2-201ENST00000602601 557 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 HULC.1-201ENST00000612720 240 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AC090971.4-201ENST00000560291 1800 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 AC114546.3-201ENST00000623582 1734 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 KPNA2P2-201ENST00000419546 1489 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AL450326.2-201ENST00000421913 1962 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 RNU6-374P-201ENST00000364146 108 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 SNORA51.6-201ENST00000384151 125 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 SNRPEP2-201ENST00000397592 279 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC004552.1-201ENST00000419089 348 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC093698.1-201ENST00000423843 571 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AL132765.1-201ENST00000434165 553 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 TRBV26-201ENST00000456572 344 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 ARPC3P2-201ENST00000457786 533 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 RN7SL610P-201ENST00000463845 291 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 RPS26P3-201ENST00000470205 348 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC109327.1-201ENST00000471666 403 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC090543.2-201ENST00000483963 348 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 NIP7P2-201ENST00000485801 544 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC004057.1-201ENST00000485827 348 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC139783.2-201ENST00000504847 1145 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC006499.5-201ENST00000505037 514 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC090071.1-201ENST00000507713 644 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC093824.1-201ENST00000508796 343 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC104057.1-201ENST00000515547 497 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 SNORD116-26-201ENST00000516006 96 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 RNA5SP49-201ENST00000516450 115 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 RPL12P22-201ENST00000519073 490 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC137768.1-201ENST00000549998 553 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AGGF1P8-201ENST00000562979 1000 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 MIR4504-201ENST00000577413 92 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 MIR4715-201ENST00000584117 79 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms