Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 OR52H1-202ENST00000641796 1061 ntBASIC1.53□□□□□ -2.16
LINC01558Q9Y6Z2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AL359693.1-201ENST00000614959 2407 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 Z82209.1-201ENST00000422141 2135 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 ZNF37BP-203ENST00000452306 1352 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 RNA5SP197-201ENST00000363357 119 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 RN7SKP275-201ENST00000364626 301 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 RNA5SP210-201ENST00000391034 120 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AL512633.1-201ENST00000399931 655 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 RN7SKP111-201ENST00000410349 271 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC096533.1-201ENST00000411645 353 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 RPS20P25-201ENST00000412447 352 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 RPS7P15-201ENST00000415804 584 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 COX6B1P1-201ENST00000415962 213 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 BX510359.3-201ENST00000422168 306 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AL592293.2-201ENST00000422292 996 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 RPL7P37-201ENST00000425095 738 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 GCA-203ENST00000429691 824 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 RPL12P49-201ENST00000441100 121 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC011753.1-201ENST00000451001 220 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 RBM43P1-201ENST00000476891 1081 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC004453.1-201ENST00000487895 408 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC090096.1-201ENST00000489168 390 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 SRIP1-201ENST00000489235 288 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC110792.1-201ENST00000491826 472 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC090543.1-201ENST00000492168 485 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 SNORD46.2-201ENST00000516021 102 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 OR7K1P-201ENST00000546439 926 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC121758.2-201ENST00000553271 193 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC006116.5-201ENST00000591936 559 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 VN1R78P-201ENST00000597393 564 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC015726.1-201ENST00000602353 681 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 U73023.1-201ENST00000603134 700 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AC005191.1-201ENST00000603950 358 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 AL589674.2-201ENST00000604304 337 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 RNA5SP440-201ENST00000612665 119 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 U4.6-201ENST00000621618 127 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 CR381653.2-201ENST00000624041 768 ntBASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
LINC01558Q9Y6Z2 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 AL645568.2-201ENST00000432815 1337 ntBASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 AL122126.1-201ENST00000546905 1318 ntBASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 RN7SKP149-201ENST00000363008 344 ntBASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 RNA5SP123-201ENST00000363244 119 ntBASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 IARS-201ENST00000375627 697 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 MIR142-201ENST00000384835 87 ntBASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 RNA5SP252-201ENST00000391131 119 ntBASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 SNORA3.3-201ENST00000408712 125 ntBASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 RNA5SP498-201ENST00000411342 120 ntBASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 AC244033.1-201ENST00000426826 870 ntBASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 ATP5C1P1-201ENST00000441945 895 ntBASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 RN7SL172P-201ENST00000460535 303 ntBASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 SYPL1P1-201ENST00000473622 768 ntBASIC1.51□□□□□ -2.17
LINC01558Q9Y6Z2 RPL12P20-201ENST00000475538 479 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms