Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 AL354710.1-201ENST00000453641 246 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 AC005008.1-201ENST00000456151 612 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 AC245028.2-201ENST00000458673 253 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 RNU7-167P-201ENST00000459160 62 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 RN7SL552P-201ENST00000462094 276 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 RPS3AP41-201ENST00000462701 778 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 RPS23P3-201ENST00000470993 430 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 RPL38P3-201ENST00000484463 213 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 AC026979.1-201ENST00000492525 396 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 AC083906.1-201ENST00000509298 406 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 RNU6-406P-201ENST00000516470 107 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 RNU6-1069P-201ENST00000516612 133 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 RNU6-323P-201ENST00000521915 107 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 AC090115.3-201ENST00000553218 849 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 AC026826.3-201ENST00000561747 158 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 AC125232.2-201ENST00000592457 143 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 AC098479.1-201ENST00000609225 154 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 AC009570.1-201ENST00000609599 745 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 RN7SL261P-201ENST00000613441 282 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 AL118522.2-201ENST00000616045 615 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 MIR6778-201ENST00000617912 73 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 AC137590.2-201ENST00000619709 240 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 AC129915.3-201ENST00000634128 948 ntBASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
HRH3Q9Y5N1 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 AC010329.1-201ENST00000593903 8328 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 SNORD62.1-201ENST00000362541 86 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 RN7SKP15-201ENST00000364742 309 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 RNU6-434P-201ENST00000384376 107 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 RNU1-46P-201ENST00000384425 164 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 MIR92A2-201ENST00000385299 75 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 MTATP6P29-201ENST00000415057 132 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 RPL21P112-201ENST00000434403 463 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 AP000936.3-201ENST00000438127 255 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 RPL12P11-201ENST00000439970 501 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 HSFY6P-201ENST00000445573 403 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 OR1H1P-201ENST00000448731 937 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 PPIAP3-201ENST00000450588 505 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 AL353691.1-201ENST00000451332 387 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 AC133473.1-201ENST00000455173 299 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 SNRPCP3-201ENST00000474888 476 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 RPS27AP1-201ENST00000475545 471 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 AC068781.1-201ENST00000488231 618 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 RN7SL362P-201ENST00000494228 267 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 AC113367.2-201ENST00000505749 160 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 RNA5SP441-201ENST00000516809 88 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 AC023157.2-201ENST00000540596 141 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 AC006512.2-201ENST00000543250 486 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 AC079600.1-201ENST00000550326 297 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 AC026371.1-201ENST00000551867 419 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 AC011626.1-201ENST00000604710 562 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 AL096712.1-201ENST00000614561 159 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms