Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 RNU2-31P-201ENST00000516954 155 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AL133271.1-201ENST00000538229 291 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 SYF2P1-201ENST00000550658 413 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 MIR5682-201ENST00000584864 76 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AC011487.3-201ENST00000593607 453 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AL162424.1-201ENST00000602325 221 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AL160281.1-201ENST00000605307 311 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 uc_338.9-201ENST00000617424 182 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 TATDN2P3-201ENST00000452855 3665 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 PRO1804-201ENST00000623780 2050 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 AC105114.1-201ENST00000624795 1862 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 CYP2G2P-201ENST00000594920 1485 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 RNU6-1130P-201ENST00000365434 107 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 RNU6-946P-201ENST00000383878 107 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 MTCYBP2-201ENST00000407745 171 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 AL030996.1-201ENST00000411430 235 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 EI24P1-201ENST00000416584 867 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 RPL23AP38-201ENST00000423801 469 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 AL589794.1-201ENST00000424971 390 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 AL138479.1-201ENST00000426913 484 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 AC239800.1-201ENST00000442049 719 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 CFL1P4-201ENST00000451536 498 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 RN7SL717P-201ENST00000478343 297 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 AC098583.1-201ENST00000480875 255 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 RN7SL849P-201ENST00000485236 295 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 RPL23AP80-201ENST00000495605 424 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 RNA5SP75-201ENST00000516841 111 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 RN7SKP98-201ENST00000517070 156 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 IGKV1D-32-201ENST00000517449 318 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 AC091144.1-201ENST00000519573 138 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 AC103855.4-201ENST00000533158 265 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 FXYD6P1-201ENST00000604857 285 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 AL035410.2-201ENST00000604963 864 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 AL121917.1-203ENST00000605534 577 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 AC007785.2-201ENST00000598627 1916 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 AC025809.2-201ENST00000625085 1802 ntBASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.75□□□□□ -1.33
VPS9D1Q9Y2B5 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 AP000866.6-201ENST00000638898 3579 ntBASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 AC100821.1-201ENST00000523153 2479 ntBASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 RN7SKP189-201ENST00000365042 330 ntBASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 RNU1-55P-201ENST00000365510 158 ntBASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 MIR99A-201ENST00000384906 81 ntBASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 RN7SKP137-201ENST00000411074 307 ntBASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 CBX1P3-201ENST00000413296 527 ntBASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 AL591704.1-201ENST00000432574 275 ntBASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.74□□□□□ -1.33
VPS9D1Q9Y2B5 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms