Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SNORA67.4-201ENST00000384688 142 ntBASIC4.33□□□□□ -1.72
SHANK2Q9UPX8 AL513328.1-201ENST00000446460 224 ntBASIC4.33□□□□□ -1.72
SHANK2Q9UPX8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.33□□□□□ -1.72
SHANK2Q9UPX8 RNA5SP24-201ENST00000516478 95 ntBASIC4.33□□□□□ -1.72
SHANK2Q9UPX8 AC096947.1-201ENST00000603233 470 ntBASIC4.33□□□□□ -1.72
SHANK2Q9UPX8 OR6R2P-201ENST00000609216 300 ntBASIC4.33□□□□□ -1.72
SHANK2Q9UPX8 AC009159.1-201ENST00000618386 642 ntBASIC4.33□□□□□ -1.72
SHANK2Q9UPX8 AC063923.1-201ENST00000478982 1619 ntBASIC4.33□□□□□ -1.72
SHANK2Q9UPX8 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.33□□□□□ -1.72
SHANK2Q9UPX8 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SHANK2Q9UPX8 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHANK2Q9UPX8 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.32□□□□□ -1.72
SHANK2Q9UPX8 RNA5SP21-201ENST00000410917 96 ntBASIC4.32□□□□□ -1.72
SHANK2Q9UPX8 AC087499.2-201ENST00000432861 149 ntBASIC4.32□□□□□ -1.72
SHANK2Q9UPX8 AC008549.1-201ENST00000512900 643 ntBASIC4.32□□□□□ -1.72
SHANK2Q9UPX8 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.32□□□□□ -1.72
SHANK2Q9UPX8 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.32□□□□□ -1.72
SHANK2Q9UPX8 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
SHANK2Q9UPX8 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SHANK2Q9UPX8 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 PROS2P-201ENST00000474651 1951 ntBASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 SNORA46-201ENST00000384762 135 ntBASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 MIR34A-201ENST00000385130 110 ntBASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 AL360182.1-201ENST00000397433 468 ntBASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 RN7SKP285-201ENST00000410137 318 ntBASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 RPS3P1-201ENST00000456781 192 ntBASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 SNORD109B-201ENST00000458961 67 ntBASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 SNORD109A-201ENST00000459128 67 ntBASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 AC008413.1-201ENST00000511864 177 ntBASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 AP000873.5-201ENST00000533906 236 ntBASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 MIR5047-201ENST00000579212 100 ntBASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 AC090312.2-201ENST00000582687 378 ntBASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 U7.8-201ENST00000619968 63 ntBASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 AC064859.1-201ENST00000624741 174 ntBASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 AC017002.4-201ENST00000604721 1525 ntBASIC4.31□□□□□ -1.72
SHANK2Q9UPX8 RAP1BP1-201ENST00000412709 553 ntBASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 AL592148.1-201ENST00000413568 445 ntBASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 RPL29P29-201ENST00000448725 423 ntBASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 snoU13.23-201ENST00000458863 104 ntBASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 FAM172BP-201ENST00000487497 1089 ntBASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 AC234778.2-201ENST00000566241 354 ntBASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 U3.6-201ENST00000363622 211 ntBASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 RNU2-52P-201ENST00000410680 190 ntBASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 WASF1P1-201ENST00000447560 1131 ntBASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 AC111000.2-201ENST00000507775 550 ntBASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 RNU6-991P-201ENST00000516168 107 ntBASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 AL049874.4-201ENST00000557593 255 ntBASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 AC016590.3-201ENST00000611171 753 ntBASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.3□□□□□ -1.72
SHANK2Q9UPX8 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHANK2Q9UPX8 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SHANK2Q9UPX8 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.29□□□□□ -1.72
SHANK2Q9UPX8 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.29□□□□□ -1.72
SHANK2Q9UPX8 AL162389.1-201ENST00000449233 177 ntBASIC4.29□□□□□ -1.72
SHANK2Q9UPX8 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.29□□□□□ -1.72
SHANK2Q9UPX8 AL158827.2-201ENST00000602494 330 ntBASIC4.29□□□□□ -1.72
SHANK2Q9UPX8 AL691447.3-201ENST00000635020 330 ntBASIC4.29□□□□□ -1.72
SHANK2Q9UPX8 RNA5SP383-201ENST00000362934 120 ntBASIC4.28□□□□□ -1.72
SHANK2Q9UPX8 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SHANK2Q9UPX8 RNA5SP107-201ENST00000411358 122 ntBASIC4.28□□□□□ -1.72
SHANK2Q9UPX8 SMC4P1-201ENST00000414479 527 ntBASIC4.28□□□□□ -1.72
SHANK2Q9UPX8 MRPL50P2-201ENST00000416821 482 ntBASIC4.28□□□□□ -1.72
SHANK2Q9UPX8 AC245291.1-201ENST00000419501 328 ntBASIC4.28□□□□□ -1.72
SHANK2Q9UPX8 RPL31P12-201ENST00000422587 358 ntBASIC4.28□□□□□ -1.72
SHANK2Q9UPX8 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.28□□□□□ -1.72
SHANK2Q9UPX8 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.28□□□□□ -1.72
SHANK2Q9UPX8 AC008837.1-201ENST00000511513 412 ntBASIC4.28□□□□□ -1.72
SHANK2Q9UPX8 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.28□□□□□ -1.72
SHANK2Q9UPX8 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.28□□□□□ -1.72
SHANK2Q9UPX8 AC007954.1-201ENST00000554198 494 ntBASIC4.28□□□□□ -1.72
SHANK2Q9UPX8 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.28□□□□□ -1.72
SHANK2Q9UPX8 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms