Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AC233263.6-201ENST00000631132 1963 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 AC006020.1-201ENST00000420179 1854 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 AC127391.1-201ENST00000411737 98 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 GJA6P-201ENST00000415117 1042 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 SLC35E1P1-201ENST00000419313 864 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 AL139148.1-201ENST00000427122 680 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 ERLEC1P1-201ENST00000433806 578 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 CYCSP51-201ENST00000443545 318 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 AL353898.1-201ENST00000444055 238 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 RPS23P9-201ENST00000448848 438 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 NDUFAF4P3-201ENST00000456468 525 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 AC097473.1-201ENST00000508142 408 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 RNA5SP216-201ENST00000516111 123 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 Y_RNA.665-201ENST00000516177 98 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 RNU6-864P-201ENST00000516256 108 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 RNU6-1212P-201ENST00000517023 104 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 CDH12P4-201ENST00000517835 295 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 CDH12P3-201ENST00000517935 295 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 CDH12P1-201ENST00000518435 295 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 AC012400.1-201ENST00000518452 381 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 AF038458.1-201ENST00000588406 262 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 AC097468.3-201ENST00000607956 456 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 AL133173.2-201ENST00000614270 90 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 AC004792.1-201ENST00000614523 137 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 MAPK6PS2-201ENST00000379571 2060 ntBASIC7.28□□□□□ -1.24
PDZRN3Q9UPQ7 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC7.27□□□□□ -1.24
PDZRN3Q9UPQ7 MTCO1P7-201ENST00000419523 1542 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 CD86-204ENST00000469710 1604 ntTSL 2 BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 AC232271.1-201ENST00000602455 2715 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 Y_RNA.14-201ENST00000362415 103 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 RNA5SP183-201ENST00000362452 119 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 RNA5SP507-201ENST00000363603 121 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 Y_RNA.389-201ENST00000383924 113 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 Y_RNA.463-201ENST00000384271 102 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 MIR142-201ENST00000384835 87 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 MRPL42P2-201ENST00000403169 426 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 AL078604.1-201ENST00000404609 466 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 RNU2-38P-201ENST00000410856 79 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 AC127526.1-201ENST00000417526 366 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 AC083875.1-201ENST00000419509 405 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 AL133396.1-201ENST00000432048 687 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 DYNLT3P2-201ENST00000442517 295 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 GSTA11P-201ENST00000452866 669 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 MTND4LP30-201ENST00000454092 297 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 MTCO1P42-201ENST00000457379 726 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 AC005532.2-201ENST00000467154 373 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 AC011005.2-201ENST00000487324 359 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 SLC25A15P5-201ENST00000508033 253 ntBASIC7.27□□□□□ -1.25
PDZRN3Q9UPQ7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms