Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 AL161713.1-201ENST00000555538 145 ntBASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 AL390816.3-201ENST00000604527 1066 ntBASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 AC092953.2-201ENST00000608000 699 ntBASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 AC128687.2-201ENST00000609657 566 ntBASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 AL391262.2-201ENST00000622466 494 ntBASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 AC004808.1-201ENST00000627671 721 ntBASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 SGO1P1-201ENST00000603525 1447 ntBASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 AL353743.1-202ENST00000431724 1695 ntBASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 AL603865.2-201ENST00000401679 213 ntBASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 AL831737.1-201ENST00000441288 271 ntBASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 TRBV12-2-201ENST00000489763 344 ntBASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 AC118282.2-201ENST00000508739 374 ntBASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 AC110792.2-201ENST00000510278 224 ntBASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 NCAPGP2-201ENST00000557911 754 ntBASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 AL445984.1-201ENST00000637834 659 ntBASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 OR6C64P-201ENST00000419708 825 ntBASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 NDUFB1P1-201ENST00000435191 180 ntBASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 RPS27P23-201ENST00000487608 251 ntBASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 AC108941.1-201ENST00000502853 530 ntBASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 HIGD1AP6-201ENST00000521833 279 ntBASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 AC118942.1-201ENST00000529674 1035 ntBASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 AC004217.3-201ENST00000551552 878 ntBASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 MTCO1P40-201ENST00000574371 625 ntBASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 AC006504.3-201ENST00000586818 523 ntBASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SHROOM4Q9ULL8 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 Z73965.1-201ENST00000623412 2297 ntBASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 RNA5SP374-201ENST00000362939 125 ntBASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 AL354692.1-201ENST00000423044 315 ntBASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 AC092634.2-201ENST00000428146 1010 ntBASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 UBE2V1P1-201ENST00000430836 445 ntBASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 NAP1L1P3-201ENST00000462291 880 ntBASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 PRDX3P4-201ENST00000470828 747 ntBASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 ARL4AP1-201ENST00000503220 705 ntBASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 AC023161.2-201ENST00000551218 780 ntBASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 AC067852.4-201ENST00000590314 478 ntBASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 AP001542.2-201ENST00000593141 364 ntBASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 MIR7851-201ENST00000610611 160 ntBASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC6.91□□□□□ -1.3
SHROOM4Q9ULL8 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC6.9□□□□□ -1.3
SHROOM4Q9ULL8 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.9□□□□□ -1.3
SHROOM4Q9ULL8 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SHROOM4Q9ULL8 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SHROOM4Q9ULL8 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SHROOM4Q9ULL8 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 AC016716.1-201ENST00000265882 708 ntBASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms