Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC003982.1-202ENST00000469928 248 ntBASIC3.66□□□□□ -1.82
SCN11AQ9UI33 AP002884.2-201ENST00000471647 395 ntBASIC3.66□□□□□ -1.82
SCN11AQ9UI33 AC126121.1-201ENST00000482313 553 ntBASIC3.66□□□□□ -1.82
SCN11AQ9UI33 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
SCN11AQ9UI33 OR4C2P-201ENST00000530855 1064 ntBASIC3.66□□□□□ -1.82
SCN11AQ9UI33 AL358913.1-201ENST00000554342 121 ntBASIC3.66□□□□□ -1.82
SCN11AQ9UI33 AC009101.1-201ENST00000568135 242 ntBASIC3.66□□□□□ -1.82
SCN11AQ9UI33 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.66□□□□□ -1.82
SCN11AQ9UI33 MIR7843-201ENST00000622274 79 ntBASIC3.66□□□□□ -1.82
SCN11AQ9UI33 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SCN11AQ9UI33 CDC27P2-201ENST00000425026 1922 ntBASIC3.66□□□□□ -1.82
SCN11AQ9UI33 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SCN11AQ9UI33 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SCN11AQ9UI33 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.66□□□□□ -1.82
SCN11AQ9UI33 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SCN11AQ9UI33 AL583834.1-201ENST00000406943 343 ntBASIC3.66□□□□□ -1.82
SCN11AQ9UI33 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.66□□□□□ -1.82
SCN11AQ9UI33 AC245054.2-201ENST00000415639 319 ntBASIC3.66□□□□□ -1.82
SCN11AQ9UI33 AC245291.1-201ENST00000419501 328 ntBASIC3.66□□□□□ -1.82
SCN11AQ9UI33 RPL23AP4-201ENST00000427757 463 ntBASIC3.66□□□□□ -1.82
SCN11AQ9UI33 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.66□□□□□ -1.82
SCN11AQ9UI33 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SCN11AQ9UI33 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.66□□□□□ -1.82
SCN11AQ9UI33 AP000919.1-202ENST00000581139 1264 ntBASIC3.66□□□□□ -1.82
SCN11AQ9UI33 VN1R78P-201ENST00000597393 564 ntBASIC3.66□□□□□ -1.82
SCN11AQ9UI33 AP004607.9-201ENST00000618202 316 ntBASIC3.66□□□□□ -1.82
SCN11AQ9UI33 U7.8-201ENST00000619968 63 ntBASIC3.66□□□□□ -1.82
SCN11AQ9UI33 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.66□□□□□ -1.82
SCN11AQ9UI33 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SCN11AQ9UI33 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SCN11AQ9UI33 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SCN11AQ9UI33 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SCN11AQ9UI33 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SCN11AQ9UI33 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SCN11AQ9UI33 RNU1-35P-201ENST00000362782 153 ntBASIC3.65□□□□□ -1.83
SCN11AQ9UI33 MTCO1P52-201ENST00000433928 531 ntBASIC3.65□□□□□ -1.83
SCN11AQ9UI33 AL355493.4-201ENST00000618530 292 ntBASIC3.65□□□□□ -1.83
SCN11AQ9UI33 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.65□□□□□ -1.83
SCN11AQ9UI33 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SCN11AQ9UI33 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.65□□□□□ -1.83
SCN11AQ9UI33 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SCN11AQ9UI33 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.64□□□□□ -1.83
SCN11AQ9UI33 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SCN11AQ9UI33 RNA5SP383-201ENST00000362934 120 ntBASIC3.64□□□□□ -1.83
SCN11AQ9UI33 HSPD1P16-201ENST00000402302 394 ntBASIC3.64□□□□□ -1.83
SCN11AQ9UI33 MTCO1P51-201ENST00000427672 1060 ntBASIC3.64□□□□□ -1.83
SCN11AQ9UI33 MYL8P-204ENST00000431574 518 ntBASIC3.64□□□□□ -1.83
SCN11AQ9UI33 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.64□□□□□ -1.83
SCN11AQ9UI33 RPL29P29-201ENST00000448725 423 ntBASIC3.64□□□□□ -1.83
SCN11AQ9UI33 AC107015.1-201ENST00000466902 747 ntBASIC3.64□□□□□ -1.83
SCN11AQ9UI33 AP001025.2-201ENST00000490908 477 ntBASIC3.64□□□□□ -1.83
SCN11AQ9UI33 RN7SKP60-201ENST00000516985 239 ntBASIC3.64□□□□□ -1.83
SCN11AQ9UI33 IGKV2D-23-201ENST00000518179 286 ntBASIC3.64□□□□□ -1.83
SCN11AQ9UI33 AC007954.1-201ENST00000554198 494 ntBASIC3.64□□□□□ -1.83
SCN11AQ9UI33 AC138761.3-201ENST00000579993 334 ntBASIC3.64□□□□□ -1.83
SCN11AQ9UI33 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SCN11AQ9UI33 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 RNU6-304P-201ENST00000364855 107 ntBASIC3.63□□□□□ -1.83
SCN11AQ9UI33 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 SNORA67.4-201ENST00000384688 142 ntBASIC3.63□□□□□ -1.83
SCN11AQ9UI33 AL138827.1-201ENST00000402666 306 ntBASIC3.63□□□□□ -1.83
SCN11AQ9UI33 RNA5SP274-201ENST00000410484 108 ntBASIC3.63□□□□□ -1.83
SCN11AQ9UI33 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 UQCRHP3-201ENST00000451503 251 ntBASIC3.63□□□□□ -1.83
SCN11AQ9UI33 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 RN7SL633P-201ENST00000488974 297 ntBASIC3.63□□□□□ -1.83
SCN11AQ9UI33 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 RNU1-87P-201ENST00000363727 170 ntBASIC3.63□□□□□ -1.83
SCN11AQ9UI33 SNORA70B-201ENST00000384210 135 ntBASIC3.63□□□□□ -1.83
SCN11AQ9UI33 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 SRIP1-201ENST00000489235 288 ntBASIC3.63□□□□□ -1.83
SCN11AQ9UI33 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 AC008121.2-201ENST00000614647 523 ntBASIC3.63□□□□□ -1.83
SCN11AQ9UI33 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 MAPK10-373ENST00000641983 6772 ntBASIC3.63□□□□□ -1.83
SCN11AQ9UI33 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.63□□□□□ -1.83
SCN11AQ9UI33 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.62□□□□□ -1.83
SCN11AQ9UI33 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SCN11AQ9UI33 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SCN11AQ9UI33 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.62□□□□□ -1.83
SCN11AQ9UI33 AC063976.3-201ENST00000426849 329 ntBASIC3.62□□□□□ -1.83
SCN11AQ9UI33 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.62□□□□□ -1.83
SCN11AQ9UI33 AP000936.2-201ENST00000447151 681 ntBASIC3.62□□□□□ -1.83
SCN11AQ9UI33 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.62□□□□□ -1.83
SCN11AQ9UI33 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.62□□□□□ -1.83
SCN11AQ9UI33 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.62□□□□□ -1.83
SCN11AQ9UI33 AC114781.4-201ENST00000513707 639 ntBASIC3.62□□□□□ -1.83
SCN11AQ9UI33 RNU4-29P-201ENST00000515943 174 ntBASIC3.62□□□□□ -1.83
SCN11AQ9UI33 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.62□□□□□ -1.83
SCN11AQ9UI33 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms