Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 RNU6-216P-201ENST00000363282 104 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 RNU5D-1-201ENST00000363299 116 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 SNORA70.2-201ENST00000364506 135 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 Y_RNA.472-201ENST00000384322 102 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 RPL23AP48-201ENST00000406913 488 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 JKAMPP1-201ENST00000413804 919 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 AIMP1P1-201ENST00000418670 937 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 AC127537.2-201ENST00000439258 465 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 ZNF886P-201ENST00000450781 723 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 HMGB3P22-202ENST00000451823 572 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 RPS20P24-201ENST00000457473 361 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 PLGLA-201ENST00000465668 449 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 AC108078.3-201ENST00000502633 489 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 AC108064.1-201ENST00000513791 460 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 OR7E13P-201ENST00000526052 910 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 AC125611.1-201ENST00000549563 229 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 AC136624.4-201ENST00000573044 370 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 RPL23AP92-201ENST00000603609 255 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 AC091167.4-201ENST00000605079 184 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 AP001521.1-201ENST00000609150 300 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 AC009237.17-201ENST00000618111 748 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 AC073348.1-201ENST00000623002 331 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 MTND2P41-201ENST00000637599 773 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 NUP58P1-201ENST00000502546 1738 ntBASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
BLOC1S4Q9NUP1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 MTND4P10-201ENST00000446199 1363 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 MIR607-201ENST00000385241 96 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 MIR1251-201ENST00000408552 70 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 RNU2-42P-201ENST00000410697 113 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 MTCO2P8-201ENST00000412213 658 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 FNDC3CP-201ENST00000420795 1155 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 AC013410.2-201ENST00000422627 201 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 AL513174.1-201ENST00000423182 629 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 RPL7P44-201ENST00000424827 742 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 AC004854.1-201ENST00000440356 349 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 VN1R10P-201ENST00000447106 875 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 TPT1P12-201ENST00000448968 492 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 AC092757.1-201ENST00000467293 467 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 RNU2-58P-201ENST00000516403 183 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 RNA5SP179-201ENST00000517284 121 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 RN7SL339P-201ENST00000580597 296 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 BNIP3P24-201ENST00000593398 557 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 AC016877.3-201ENST00000606778 504 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 AC128687.2-201ENST00000609657 566 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 AC112484.5-201ENST00000624189 228 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 AC092184.1-201ENST00000625042 715 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 OR4G3P-201ENST00000633500 913 ntBASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
BLOC1S4Q9NUP1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 RNA5SP502-201ENST00000362694 119 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 RNU6-560P-201ENST00000364007 108 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 RNU4-68P-201ENST00000364314 141 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 SNORA51.2-201ENST00000364595 132 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 RNU6-657P-201ENST00000383904 107 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 RNU6-1181P-201ENST00000384191 106 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 RNU6-584P-201ENST00000410350 95 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 AL691449.1-201ENST00000426570 421 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms