Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC011477.5-201ENST00000586571 259 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 AC012065.4-201ENST00000602445 679 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 AL357080.1-201ENST00000617394 239 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 AC011944.2-201ENST00000624440 683 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
VTA1Q9NP79 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
VTA1Q9NP79 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
VTA1Q9NP79 ADAM5-202ENST00000399789 1942 ntBASIC5.21□□□□□ -1.57
VTA1Q9NP79 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 AC104623.2-202ENST00000623477 4002 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VTA1Q9NP79 RNY4P24-201ENST00000362735 96 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 MIR320C1-201ENST00000408566 88 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 Y_RNA.599-201ENST00000410489 109 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 RPL31P2-201ENST00000413849 377 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 RPL7P30-201ENST00000420888 709 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 RPL7P57-201ENST00000423238 740 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 AC004975.1-201ENST00000428733 208 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 UBE2V1P3-201ENST00000439651 417 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 CBX1P1-201ENST00000440184 427 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 USP9YP29-201ENST00000445112 563 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VTA1Q9NP79 NUTF2P7-201ENST00000453086 375 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 AC245028.2-201ENST00000458673 253 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 RNU7-136P-201ENST00000458819 69 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 RNA5SP103-201ENST00000459503 118 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 AP000797.1-201ENST00000478870 387 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 PRELID3BP7-201ENST00000503606 469 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 RNU6-720P-201ENST00000516363 108 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 AP004247.1-201ENST00000531556 1289 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 AC141257.3-201ENST00000572906 215 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 AC127024.5-201ENST00000580085 462 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 AC239868.4-201ENST00000608318 671 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 AC087241.4-201ENST00000612441 480 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 AC025031.4-201ENST00000621248 3271 ntBASIC5.21□□□□□ -1.58
VTA1Q9NP79 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VTA1Q9NP79 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
VTA1Q9NP79 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VTA1Q9NP79 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
VTA1Q9NP79 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VTA1Q9NP79 MTND4P26-201ENST00000415971 1359 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTA1Q9NP79 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.2□□□□□ -1.58
VTA1Q9NP79 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
VTA1Q9NP79 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTA1Q9NP79 MIR659-201ENST00000384963 97 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 AL121972.1-201ENST00000402023 252 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 SNORA11-201ENST00000408789 128 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 RNU2-21P-201ENST00000410368 188 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 AC073136.2-201ENST00000417282 849 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.2□□□□□ -1.58
VTA1Q9NP79 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.2□□□□□ -1.58
VTA1Q9NP79 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.2□□□□□ -1.58
VTA1Q9NP79 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.2□□□□□ -1.58
VTA1Q9NP79 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.2□□□□□ -1.58
VTA1Q9NP79 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.2□□□□□ -1.58
VTA1Q9NP79 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.2□□□□□ -1.58
VTA1Q9NP79 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.2□□□□□ -1.58
VTA1Q9NP79 AC239367.2-201ENST00000447309 705 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 MTCO1P27-201ENST00000448269 226 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 RPS20P21-201ENST00000466859 343 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 RPL21P126-201ENST00000470049 478 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 HMGB1P21-201ENST00000502313 581 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 AC110792.2-201ENST00000510278 224 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 AC024589.1-201ENST00000512207 263 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 RN7SKP21-201ENST00000516503 220 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.2□□□□□ -1.58
VTA1Q9NP79 OR4A45P-201ENST00000529954 901 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms