Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AP006245.1-201ENST00000522549 120 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 AL139174.1-201ENST00000531489 886 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.79□□□□□ -1.8
DDX47Q9H0S4 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX47Q9H0S4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.79□□□□□ -1.8
DDX47Q9H0S4 AC090616.5-202ENST00000582111 297 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DDX47Q9H0S4 AC092653.1-201ENST00000608509 531 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX47Q9H0S4 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DDX47Q9H0S4 AP000720.1-201ENST00000625091 483 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.79□□□□□ -1.8
DDX47Q9H0S4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
DDX47Q9H0S4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 ZNF37BP-203ENST00000452306 1352 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 RNU6-213P-201ENST00000384051 104 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 MIR649-201ENST00000384843 97 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AL035405.1-201ENST00000400795 710 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AL022722.2-201ENST00000402519 180 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 ZNF602P-201ENST00000405929 924 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AL139098.1-201ENST00000407291 389 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AC244098.2-201ENST00000422068 99 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 RPS27AP12-201ENST00000429552 465 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 MTCYBP15-201ENST00000433123 1127 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AL138799.3-201ENST00000438968 350 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 NPM1P49-201ENST00000448027 714 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 RNU7-170P-201ENST00000459303 61 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AC007537.2-201ENST00000472093 511 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AC104629.1-201ENST00000494226 508 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 FTH1P21-201ENST00000512179 511 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AP000790.1-201ENST00000528891 737 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 TGIF1P1-201ENST00000558095 802 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AC090666.1-201ENST00000578241 445 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 VN1R87P-201ENST00000596706 487 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AC099785.1-201ENST00000605697 437 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AC253576.2-201ENST00000618815 580 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AL357559.1-201ENST00000622228 274 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AC112484.5-201ENST00000624189 228 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 MIR492-201ENST00000638676 116 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 RIOK3P1-201ENST00000418778 1528 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DDX47Q9H0S4 AL157700.1-201ENST00000561973 1432 ntBASIC3.78□□□□□ -1.8
DDX47Q9H0S4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 AL136520.1-201ENST00000600311 1322 ntBASIC3.77□□□□□ -1.81
DDX47Q9H0S4 AC068647.1-201ENST00000489539 2265 ntBASIC3.77□□□□□ -1.81
DDX47Q9H0S4 AC058791.1-201ENST00000608412 3198 ntBASIC3.77□□□□□ -1.81
DDX47Q9H0S4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 MIR30E-201ENST00000362104 92 ntBASIC3.77□□□□□ -1.81
DDX47Q9H0S4 AP002088.1-201ENST00000382740 395 ntBASIC3.77□□□□□ -1.81
DDX47Q9H0S4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 OFD1P18Y-201ENST00000420889 959 ntBASIC3.77□□□□□ -1.81
DDX47Q9H0S4 OSTCP5-201ENST00000425293 453 ntBASIC3.77□□□□□ -1.81
DDX47Q9H0S4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 SETD6P1-201ENST00000444575 317 ntBASIC3.77□□□□□ -1.81
DDX47Q9H0S4 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 RPL7P19-201ENST00000469948 618 ntBASIC3.77□□□□□ -1.81
DDX47Q9H0S4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX47Q9H0S4 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms