Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.44□□□□□ -1.7
SCAPERQ9BY12 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.44□□□□□ -1.7
SCAPERQ9BY12 AP002812.4-201ENST00000532139 286 ntBASIC4.44□□□□□ -1.7
SCAPERQ9BY12 AC234778.2-201ENST00000566241 354 ntBASIC4.44□□□□□ -1.7
SCAPERQ9BY12 PLCE1P1-201ENST00000622094 305 ntBASIC4.44□□□□□ -1.7
SCAPERQ9BY12 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.43□□□□□ -1.7
SCAPERQ9BY12 SNORA9.2-201ENST00000365361 133 ntBASIC4.43□□□□□ -1.7
SCAPERQ9BY12 SNORA67.4-201ENST00000384688 142 ntBASIC4.43□□□□□ -1.7
SCAPERQ9BY12 ISCA1P2-201ENST00000438679 421 ntBASIC4.43□□□□□ -1.7
SCAPERQ9BY12 AC010095.1-201ENST00000443543 144 ntBASIC4.43□□□□□ -1.7
SCAPERQ9BY12 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.43□□□□□ -1.7
SCAPERQ9BY12 AC104687.1-201ENST00000485829 412 ntBASIC4.43□□□□□ -1.7
SCAPERQ9BY12 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.43□□□□□ -1.7
SCAPERQ9BY12 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.43□□□□□ -1.7
SCAPERQ9BY12 PDCL2P2-201ENST00000533651 189 ntBASIC4.43□□□□□ -1.7
SCAPERQ9BY12 AC026790.2-201ENST00000606282 430 ntBASIC4.43□□□□□ -1.7
SCAPERQ9BY12 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.43□□□□□ -1.7
SCAPERQ9BY12 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.43□□□□□ -1.7
SCAPERQ9BY12 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SCAPERQ9BY12 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.42□□□□□ -1.7
SCAPERQ9BY12 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.42□□□□□ -1.7
SCAPERQ9BY12 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCAPERQ9BY12 SNORA70B-201ENST00000384210 135 ntBASIC4.42□□□□□ -1.7
SCAPERQ9BY12 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCAPERQ9BY12 AL513328.1-201ENST00000446460 224 ntBASIC4.42□□□□□ -1.7
SCAPERQ9BY12 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.42□□□□□ -1.7
SCAPERQ9BY12 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.42□□□□□ -1.7
SCAPERQ9BY12 CBX3P5-201ENST00000552017 521 ntBASIC4.42□□□□□ -1.7
SCAPERQ9BY12 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCAPERQ9BY12 AL590808.1-201ENST00000618696 141 ntBASIC4.42□□□□□ -1.7
SCAPERQ9BY12 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCAPERQ9BY12 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCAPERQ9BY12 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCAPERQ9BY12 RNA5SP293-201ENST00000410527 113 ntBASIC4.41□□□□□ -1.7
SCAPERQ9BY12 RPS12P23-201ENST00000419579 400 ntBASIC4.41□□□□□ -1.7
SCAPERQ9BY12 DUTP6-201ENST00000425573 462 ntBASIC4.41□□□□□ -1.7
SCAPERQ9BY12 ARL5AP4-201ENST00000430731 512 ntBASIC4.41□□□□□ -1.7
SCAPERQ9BY12 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SCAPERQ9BY12 NIPA2P5-201ENST00000452282 464 ntBASIC4.41□□□□□ -1.7
SCAPERQ9BY12 Y_RNA.638-201ENST00000459374 113 ntBASIC4.41□□□□□ -1.7
SCAPERQ9BY12 BDH2P1-201ENST00000602288 736 ntBASIC4.41□□□□□ -1.7
SCAPERQ9BY12 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.41□□□□□ -1.7
SCAPERQ9BY12 AC068722.2-201ENST00000618734 544 ntBASIC4.41□□□□□ -1.7
SCAPERQ9BY12 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCAPERQ9BY12 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCAPERQ9BY12 RAD1P1-201ENST00000231383 813 ntBASIC4.4□□□□□ -1.7
SCAPERQ9BY12 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
SCAPERQ9BY12 RNU1-75P-201ENST00000347264 129 ntBASIC4.4□□□□□ -1.7
SCAPERQ9BY12 RNU6-859P-201ENST00000362728 107 ntBASIC4.4□□□□□ -1.7
SCAPERQ9BY12 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SCAPERQ9BY12 MIR196B-201ENST00000384852 84 ntBASIC4.4□□□□□ -1.7
SCAPERQ9BY12 MIR887-201ENST00000401258 79 ntBASIC4.4□□□□□ -1.7
SCAPERQ9BY12 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.4□□□□□ -1.7
SCAPERQ9BY12 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.4□□□□□ -1.7
SCAPERQ9BY12 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.4□□□□□ -1.7
SCAPERQ9BY12 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.4□□□□□ -1.7
SCAPERQ9BY12 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.4□□□□□ -1.7
SCAPERQ9BY12 AL136097.1-201ENST00000456945 913 ntBASIC4.4□□□□□ -1.7
SCAPERQ9BY12 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.4□□□□□ -1.7
SCAPERQ9BY12 AC107016.2-201ENST00000547968 190 ntBASIC4.4□□□□□ -1.7
SCAPERQ9BY12 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.4□□□□□ -1.7
SCAPERQ9BY12 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.4□□□□□ -1.7
SCAPERQ9BY12 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SCAPERQ9BY12 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SCAPERQ9BY12 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SCAPERQ9BY12 AP003122.5-201ENST00000527668 3766 ntBASIC4.39□□□□□ -1.71
SCAPERQ9BY12 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.39□□□□□ -1.71
SCAPERQ9BY12 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.39□□□□□ -1.71
SCAPERQ9BY12 CYCSP20-201ENST00000473154 315 ntBASIC4.39□□□□□ -1.71
SCAPERQ9BY12 HSPE1P6-201ENST00000479457 291 ntBASIC4.39□□□□□ -1.71
SCAPERQ9BY12 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.39□□□□□ -1.71
SCAPERQ9BY12 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.39□□□□□ -1.71
SCAPERQ9BY12 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.39□□□□□ -1.71
SCAPERQ9BY12 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.39□□□□□ -1.71
SCAPERQ9BY12 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.39□□□□□ -1.71
SCAPERQ9BY12 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCAPERQ9BY12 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SCAPERQ9BY12 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SCAPERQ9BY12 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.38□□□□□ -1.71
SCAPERQ9BY12 ATP5F1P7-201ENST00000567330 760 ntBASIC4.38□□□□□ -1.71
SCAPERQ9BY12 AC046144.1-201ENST00000478559 1853 ntBASIC4.38□□□□□ -1.71
SCAPERQ9BY12 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SCAPERQ9BY12 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SCAPERQ9BY12 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SCAPERQ9BY12 PNPT1P2-201ENST00000456768 2050 ntBASIC4.38□□□□□ -1.71
SCAPERQ9BY12 AC017002.4-201ENST00000604721 1525 ntBASIC4.38□□□□□ -1.71
SCAPERQ9BY12 MIR9-1-201ENST00000385198 89 ntBASIC4.38□□□□□ -1.71
SCAPERQ9BY12 RPS7P13-201ENST00000413955 498 ntBASIC4.38□□□□□ -1.71
SCAPERQ9BY12 GTF2IP23-201ENST00000423746 351 ntBASIC4.38□□□□□ -1.71
SCAPERQ9BY12 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.38□□□□□ -1.71
SCAPERQ9BY12 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.38□□□□□ -1.71
SCAPERQ9BY12 RPL23AP22-201ENST00000437556 453 ntBASIC4.38□□□□□ -1.71
SCAPERQ9BY12 AP000936.2-201ENST00000447151 681 ntBASIC4.38□□□□□ -1.71
SCAPERQ9BY12 HMGN1P18-201ENST00000457642 277 ntBASIC4.38□□□□□ -1.71
SCAPERQ9BY12 FABP5P12-201ENST00000515543 389 ntBASIC4.38□□□□□ -1.71
SCAPERQ9BY12 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.38□□□□□ -1.71
SCAPERQ9BY12 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.38□□□□□ -1.71
SCAPERQ9BY12 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SCAPERQ9BY12 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SCAPERQ9BY12 AC008507.1-201ENST00000587506 734 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms