Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RPL30P2-201ENST00000414021 291 ntBASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 AC090525.1-201ENST00000479116 478 ntBASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 TRAV37-201ENST00000553906 342 ntBASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 MIR1273D-201ENST00000577266 86 ntBASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 AC010480.1-201ENST00000624823 684 ntBASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 CTSLP2-204ENST00000629029 392 ntBASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 Z98742.3-201ENST00000418637 326 ntBASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 AC008507.1-201ENST00000587506 734 ntBASIC2.39□□□□□ -2.03
CSMD1Q96PZ7 AC008725.1-201ENST00000605123 2263 ntBASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 AP000867.2-201ENST00000532468 320 ntBASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 NF1P10-201ENST00000613227 742 ntBASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 MIR8070-201ENST00000616510 88 ntBASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 TAB3P1-202ENST00000452645 1634 ntBASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 AC107081.3-201ENST00000612715 2034 ntBASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 RPL7P8-201ENST00000411964 730 ntBASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 HMGB1P19-201ENST00000517578 577 ntBASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 AC005351.1-201ENST00000511152 786 ntBASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 RNA5SP148-201ENST00000516527 94 ntBASIC2.38□□□□□ -2.03
CSMD1Q96PZ7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 OR1S2-201ENST00000302592 978 ntBASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 SNORA80E-201ENST00000384744 137 ntBASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 RPS4XP5-202ENST00000449995 1334 ntBASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 FAR1P1-201ENST00000427163 934 ntBASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 ISCA1P2-201ENST00000438679 421 ntBASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 AL662791.1-201ENST00000441992 928 ntBASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 AC009570.1-201ENST00000609599 745 ntBASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CSMD1Q96PZ7 MIR518C-201ENST00000384822 101 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 GLRXP1-201ENST00000423261 334 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 AL162389.1-201ENST00000449233 177 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 HMGB1P15-201ENST00000453854 435 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 RPL23AP70-201ENST00000483361 460 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 AP001025.2-201ENST00000490908 477 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 AL079305.1-201ENST00000623159 3008 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 AC080128.1-201ENST00000474389 1917 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 ELL2P4-201ENST00000446870 1376 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 SNORA64-201ENST00000384674 134 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 AC108078.3-201ENST00000502633 489 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 PRELID3BP7-201ENST00000503606 469 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 AC108729.3-201ENST00000513484 108 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 MIR6779-201ENST00000617283 64 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 AC092608.2-201ENST00000624427 218 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms