Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 AC040174.2-201ENST00000602701 465 ntBASIC3.27□□□□□ -1.89
COL21A1Q96P44 AL359535.1-201ENST00000612100 1087 ntBASIC3.27□□□□□ -1.89
COL21A1Q96P44 AC024595.1-201ENST00000623088 387 ntBASIC3.27□□□□□ -1.89
COL21A1Q96P44 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 U6.107-201ENST00000637108 79 ntBASIC3.27□□□□□ -1.89
COL21A1Q96P44 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL21A1Q96P44 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 MTCO1P18-201ENST00000455518 1419 ntBASIC3.27□□□□□ -1.89
COL21A1Q96P44 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.27□□□□□ -1.89
COL21A1Q96P44 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL21A1Q96P44 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL21A1Q96P44 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL21A1Q96P44 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL21A1Q96P44 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL21A1Q96P44 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL21A1Q96P44 AL353692.2-201ENST00000407054 335 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 RNA5SP293-201ENST00000410527 113 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 RNA5SP107-201ENST00000411358 122 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 AC092745.2-202ENST00000411880 369 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 AC004987.3-201ENST00000413879 771 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 AC093578.1-201ENST00000415219 368 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 CRYBB2P1-203ENST00000415709 538 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 ARL2BPP3-201ENST00000421226 480 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 AC073310.1-201ENST00000423226 1033 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 RPL37P1-201ENST00000432310 284 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 AC068135.1-201ENST00000446164 246 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.26□□□□□ -1.89
COL21A1Q96P44 MTND2P3-201ENST00000452458 470 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 MTND2P6-201ENST00000455337 1030 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 TPRKBP1-201ENST00000456243 481 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.26□□□□□ -1.89
COL21A1Q96P44 AC021205.2-201ENST00000480069 347 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 RPL23AP44-201ENST00000482216 473 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 AC126121.1-201ENST00000482313 553 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL21A1Q96P44 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.26□□□□□ -1.89
COL21A1Q96P44 PHBP14-201ENST00000512887 367 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.26□□□□□ -1.89
COL21A1Q96P44 SNORA70.18-201ENST00000516696 98 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 SNORA70.19-201ENST00000516717 90 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.26□□□□□ -1.89
COL21A1Q96P44 OR8L1P-201ENST00000534005 955 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.26□□□□□ -1.89
COL21A1Q96P44 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL21A1Q96P44 SERPINE4P-201ENST00000554978 281 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.26□□□□□ -1.89
COL21A1Q96P44 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
COL21A1Q96P44 AL161756.2-201ENST00000604597 246 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.26□□□□□ -1.89
COL21A1Q96P44 SNORA51-201ENST00000606420 132 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 AC244100.1-202ENST00000621554 382 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 U4.6-201ENST00000621618 127 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.26□□□□□ -1.89
COL21A1Q96P44 AL357559.1-201ENST00000622228 274 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 AC091953.5-201ENST00000622919 233 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 AC005858.4-201ENST00000623191 700 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
COL21A1Q96P44 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL21A1Q96P44 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.26□□□□□ -1.89
COL21A1Q96P44 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.26□□□□□ -1.89
COL21A1Q96P44 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.26□□□□□ -1.89
COL21A1Q96P44 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.26□□□□□ -1.89
COL21A1Q96P44 MTND5P3-201ENST00000438536 1800 ntBASIC3.26□□□□□ -1.89
COL21A1Q96P44 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL21A1Q96P44 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL21A1Q96P44 MTCO1P24-201ENST00000515438 1558 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 AL365440.1-201ENST00000436135 2167 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 AL353746.1-201ENST00000566293 6881 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
COL21A1Q96P44 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.25□□□□□ -1.89
COL21A1Q96P44 FRG1CP-201ENST00000358464 769 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
COL21A1Q96P44 MIR218-2-201ENST00000385006 110 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL21A1Q96P44 HMGB3P31-201ENST00000413333 595 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 RPS29P4-201ENST00000414733 161 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 AC245291.1-201ENST00000419501 328 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 PNRC2P1-201ENST00000423940 420 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 AC091390.3-201ENST00000426478 338 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 FAR1P1-201ENST00000427163 934 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 AC093422.3-201ENST00000428506 305 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 ETF1P3-201ENST00000430422 1160 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 MTND4LP7-201ENST00000431728 294 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 AC073063.1-201ENST00000434352 607 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 AC125238.1-201ENST00000448842 249 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 RPS27P29-201ENST00000463110 252 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 AP000873.1-201ENST00000463987 400 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 RPL5P23-201ENST00000496040 868 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 AC021146.5-201ENST00000503544 545 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.25□□□□□ -1.89
COL21A1Q96P44 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.25□□□□□ -1.89
COL21A1Q96P44 PTGES3P3-201ENST00000511479 482 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 RPL7L1P13-201ENST00000511702 739 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms