Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 GNRHR2P1-201ENST00000555315 631 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 AC138915.2-201ENST00000569776 97 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 AC090616.5-202ENST00000582111 297 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 AC025588.3-201ENST00000604182 274 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 AC104662.1-201ENST00000604448 511 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 AC106052.1-201ENST00000608029 497 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 AC005332.6-201ENST00000613178 446 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 AC090116.1-201ENST00000615679 446 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 uc_338.13-201ENST00000618243 179 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 U7.8-201ENST00000619968 63 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 AL445363.3-201ENST00000623080 671 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFT1Q96AA3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFT1Q96AA3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFT1Q96AA3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFT1Q96AA3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RFT1Q96AA3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFT1Q96AA3 AF127577.6-201ENST00000623352 2191 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RFT1Q96AA3 OR56B2P-202ENST00000641377 2453 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 LINC00561-201ENST00000565815 2738 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFT1Q96AA3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFT1Q96AA3 RNU1-18P-201ENST00000363062 164 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 RNU5D-1-201ENST00000363299 116 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFT1Q96AA3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFT1Q96AA3 RNU6-413P-201ENST00000384115 107 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 RPS16P5-201ENST00000406501 404 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 RNA5SP56-201ENST00000410277 118 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 RNU2-28P-201ENST00000410457 189 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 OR8G2P-201ENST00000412796 908 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AL139128.1-201ENST00000413921 941 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AL356320.2-201ENST00000417263 507 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AL356387.2-201ENST00000422272 243 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 EEF1A1P39-201ENST00000440791 250 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 VN1R25P-201ENST00000443385 738 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 VN1R40P-201ENST00000455196 941 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 RN7SL93P-201ENST00000463035 293 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 RPL5P24-201ENST00000463742 885 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 PABPC1P3-201ENST00000469174 459 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 SNRPGP3-201ENST00000469405 227 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC022034.3-201ENST00000471393 478 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC011979.1-201ENST00000472300 483 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC068587.2-201ENST00000478386 781 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC108734.3-201ENST00000481241 1165 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 UBE2CP3-201ENST00000502715 450 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC093534.1-201ENST00000504977 132 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 RN7SKP31-201ENST00000516354 278 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 RN7SKP116-201ENST00000516902 319 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 AP004242.1-201ENST00000533701 349 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC090502.2-201ENST00000549267 280 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC125611.1-201ENST00000549563 229 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC051619.2-201ENST00000559063 397 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 AGGF1P5-201ENST00000567900 919 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC021749.1-201ENST00000604322 607 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AL592436.1-201ENST00000605135 558 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 HMGN2P28-201ENST00000606102 262 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC016877.3-201ENST00000606778 504 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 AP001521.1-201ENST00000609150 300 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AL445423.1-201ENST00000609941 536 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 MIR6780A-201ENST00000615089 68 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 U73479.1-201ENST00000618062 168 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC009318.4-201ENST00000620496 486 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 MIR7703-201ENST00000620784 77 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC140479.6-201ENST00000633535 357 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC244205.2-202ENST00000635781 342 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms