Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.11□□□□□ -1.43
HPS1Q92902 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.11□□□□□ -1.43
HPS1Q92902 RPSAP7-201ENST00000456871 885 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 RNU7-59P-201ENST00000459101 61 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 RNU7-169P-201ENST00000459456 61 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 MYL6P4-201ENST00000477911 453 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 RN7SL267P-201ENST00000485107 261 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 RN7SL612P-201ENST00000497704 295 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.11□□□□□ -1.43
HPS1Q92902 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.11□□□□□ -1.43
HPS1Q92902 AC108078.2-201ENST00000510750 236 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 DCAF13P2-201ENST00000514188 555 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 SERF1AP1-201ENST00000514575 187 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 RNU6-911P-201ENST00000516523 104 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 MTND5P41-201ENST00000517498 206 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 CYCSP22-201ENST00000517555 339 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.11□□□□□ -1.43
HPS1Q92902 FAM60DP-201ENST00000524174 632 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 RANP3-201ENST00000530970 276 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.11□□□□□ -1.43
HPS1Q92902 AC036111.2-201ENST00000533247 901 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.11□□□□□ -1.43
HPS1Q92902 LSM6P2-201ENST00000552208 177 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
HPS1Q92902 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.11□□□□□ -1.43
HPS1Q92902 RN7SL667P-201ENST00000582817 298 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.11□□□□□ -1.43
HPS1Q92902 AC072026.1-201ENST00000605023 201 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 AC009779.8-202ENST00000607990 932 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 AL031777.2-201ENST00000611953 196 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.11□□□□□ -1.43
HPS1Q92902 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
HPS1Q92902 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HPS1Q92902 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HPS1Q92902 AC092070.2-203ENST00000598377 3644 ntBASIC6.11□□□□□ -1.43
HPS1Q92902 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.11□□□□□ -1.43
HPS1Q92902 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HPS1Q92902 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
HPS1Q92902 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HPS1Q92902 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HPS1Q92902 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.11□□□□□ -1.43
HPS1Q92902 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.11□□□□□ -1.43
HPS1Q92902 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HPS1Q92902 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HPS1Q92902 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HPS1Q92902 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.1□□□□□ -1.43
HPS1Q92902 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HPS1Q92902 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HPS1Q92902 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HPS1Q92902 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.1□□□□□ -1.43
HPS1Q92902 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HPS1Q92902 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HPS1Q92902 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HPS1Q92902 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HPS1Q92902 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.1□□□□□ -1.43
HPS1Q92902 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HPS1Q92902 RN7SKP184-201ENST00000362348 333 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 RN7SKP130-201ENST00000364924 301 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 RNU6-441P-201ENST00000384545 106 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 MIR517A-201ENST00000385001 87 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 RNU11-201ENST00000387069 134 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HPS1Q92902 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 EIF4EP2-201ENST00000422816 654 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC6.1□□□□□ -1.43
HPS1Q92902 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HPS1Q92902 RPL23AP25-201ENST00000430973 463 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 AL604028.2-201ENST00000437848 788 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 NUTF2P3-201ENST00000448540 384 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 AC009244.1-201ENST00000450566 258 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 RN7SL849P-201ENST00000485236 295 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 AC069499.1-201ENST00000489433 509 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 RPL10P7-201ENST00000495649 625 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
HPS1Q92902 RNU6-1338P-201ENST00000516328 91 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 SCARNA18.2-201ENST00000516882 84 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.1□□□□□ -1.43
HPS1Q92902 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.1□□□□□ -1.43
HPS1Q92902 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.1□□□□□ -1.43
HPS1Q92902 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.1□□□□□ -1.43
HPS1Q92902 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.1□□□□□ -1.43
HPS1Q92902 AC004024.1-201ENST00000549244 247 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 EEF1B2P1-201ENST00000567221 672 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
HPS1Q92902 HNRNPCP4-201ENST00000571636 900 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 MIR4643-201ENST00000577473 78 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.1□□□□□ -1.43
HPS1Q92902 AC008521.1-201ENST00000587471 187 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.1□□□□□ -1.43
HPS1Q92902 AC093227.2-201ENST00000589357 285 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 AL360012.1-201ENST00000602813 131 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 PSMA6P4-201ENST00000603247 718 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 AC012443.1-201ENST00000605605 231 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.1□□□□□ -1.43
HPS1Q92902 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.1□□□□□ -1.43
HPS1Q92902 CYP3A51P-201ENST00000633513 256 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms